Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav16nA0A075B634 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav16nA0A075B634 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16nA0A075B634 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16nA0A075B634 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16nA0A075B634 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav16nA0A075B634 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16nA0A075B634 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.12■□□□□ 0.33
Trav16nA0A075B634 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16nA0A075B634 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16nA0A075B634 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16nA0A075B634 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16nA0A075B634 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16nA0A075B634 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav16nA0A075B634 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Trav16nA0A075B634 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16nA0A075B634 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav16nA0A075B634 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16nA0A075B634 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16nA0A075B634 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16nA0A075B634 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav16nA0A075B634 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav16nA0A075B634 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16nA0A075B634 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16nA0A075B634 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16nA0A075B634 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav16nA0A075B634 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav16nA0A075B634 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trav16nA0A075B634 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.09■□□□□ 0.33
Trav16nA0A075B634 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trav16nA0A075B634 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav16nA0A075B634 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav16nA0A075B634 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav16nA0A075B634 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav16nA0A075B634 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav16nA0A075B634 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav16nA0A075B634 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav16nA0A075B634 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16nA0A075B634 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16nA0A075B634 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16nA0A075B634 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Trav16nA0A075B634 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav16nA0A075B634 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16nA0A075B634 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav16nA0A075B634 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16nA0A075B634 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16nA0A075B634 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav16nA0A075B634 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16nA0A075B634 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.06■□□□□ 0.32
Trav16nA0A075B634 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16nA0A075B634 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16nA0A075B634 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav16nA0A075B634 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.05■□□□□ 0.32
Trav16nA0A075B634 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav16nA0A075B634 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Trav16nA0A075B634 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav16nA0A075B634 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav16nA0A075B634 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav16nA0A075B634 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav16nA0A075B634 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav16nA0A075B634 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16nA0A075B634 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16nA0A075B634 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16nA0A075B634 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav16nA0A075B634 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav16nA0A075B634 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16nA0A075B634 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav16nA0A075B634 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav16nA0A075B634 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Trav16nA0A075B634 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16nA0A075B634 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16nA0A075B634 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav16nA0A075B634 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav16nA0A075B634 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.03■□□□□ 0.32
Trav16nA0A075B634 Zfp131-205ENSMUST00000223812 663 ntBASIC17.03■□□□□ 0.32
Trav16nA0A075B634 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Trav16nA0A075B634 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav16nA0A075B634 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav16nA0A075B634 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav16nA0A075B634 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav16nA0A075B634 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav16nA0A075B634 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav16nA0A075B634 Gm24970-201ENSMUST00000175582 82 ntBASIC17.01■□□□□ 0.31
Trav16nA0A075B634 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav16nA0A075B634 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav16nA0A075B634 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav16nA0A075B634 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav16nA0A075B634 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav16nA0A075B634 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav16nA0A075B634 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trav16nA0A075B634 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav16nA0A075B634 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav16nA0A075B634 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav16nA0A075B634 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav16nA0A075B634 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav16nA0A075B634 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav16nA0A075B634 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav16nA0A075B634 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav16nA0A075B634 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav16nA0A075B634 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms