Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trav8n-2A0A075B633 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trav8n-2A0A075B633 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav8n-2A0A075B633 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav8n-2A0A075B633 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav8n-2A0A075B633 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.12■□□□□ 0.97
Trav8n-2A0A075B633 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav8n-2A0A075B633 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trav8n-2A0A075B633 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav8n-2A0A075B633 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav8n-2A0A075B633 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav8n-2A0A075B633 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav8n-2A0A075B633 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trav8n-2A0A075B633 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav8n-2A0A075B633 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trav8n-2A0A075B633 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trav8n-2A0A075B633 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav8n-2A0A075B633 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav8n-2A0A075B633 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trav8n-2A0A075B633 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.07■□□□□ 0.96
Trav8n-2A0A075B633 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav8n-2A0A075B633 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav8n-2A0A075B633 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav8n-2A0A075B633 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Trav8n-2A0A075B633 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trav8n-2A0A075B633 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.06■□□□□ 0.96
Trav8n-2A0A075B633 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav8n-2A0A075B633 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav8n-2A0A075B633 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.05■□□□□ 0.96
Trav8n-2A0A075B633 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Trav8n-2A0A075B633 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trav8n-2A0A075B633 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Trav8n-2A0A075B633 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav8n-2A0A075B633 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav8n-2A0A075B633 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Trav8n-2A0A075B633 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.04■□□□□ 0.96
Trav8n-2A0A075B633 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trav8n-2A0A075B633 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.03■□□□□ 0.96
Trav8n-2A0A075B633 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.03■□□□□ 0.96
Trav8n-2A0A075B633 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trav8n-2A0A075B633 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav8n-2A0A075B633 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav8n-2A0A075B633 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav8n-2A0A075B633 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.02■□□□□ 0.96
Trav8n-2A0A075B633 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav8n-2A0A075B633 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav8n-2A0A075B633 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.02■□□□□ 0.96
Trav8n-2A0A075B633 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trav8n-2A0A075B633 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trav8n-2A0A075B633 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trav8n-2A0A075B633 Gm15039-201ENSMUST00000118914 875 ntBASIC21.01■□□□□ 0.95
Trav8n-2A0A075B633 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav8n-2A0A075B633 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav8n-2A0A075B633 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trav8n-2A0A075B633 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav8n-2A0A075B633 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.99■□□□□ 0.95
Trav8n-2A0A075B633 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav8n-2A0A075B633 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trav8n-2A0A075B633 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Trav8n-2A0A075B633 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav8n-2A0A075B633 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Trav8n-2A0A075B633 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trav8n-2A0A075B633 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trav8n-2A0A075B633 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.98■□□□□ 0.95
Trav8n-2A0A075B633 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.98■□□□□ 0.95
Trav8n-2A0A075B633 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav8n-2A0A075B633 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.97■□□□□ 0.95
Trav8n-2A0A075B633 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.97■□□□□ 0.95
Trav8n-2A0A075B633 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.97■□□□□ 0.95
Trav8n-2A0A075B633 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.97■□□□□ 0.95
Trav8n-2A0A075B633 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav8n-2A0A075B633 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trav8n-2A0A075B633 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav8n-2A0A075B633 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav8n-2A0A075B633 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav8n-2A0A075B633 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav8n-2A0A075B633 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Trav8n-2A0A075B633 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.96■□□□□ 0.95
Trav8n-2A0A075B633 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.96■□□□□ 0.95
Trav8n-2A0A075B633 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav8n-2A0A075B633 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav8n-2A0A075B633 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav8n-2A0A075B633 Gm43566-201ENSMUST00000196851 808 ntBASIC20.95■□□□□ 0.94
Trav8n-2A0A075B633 Gm15820-201ENSMUST00000201566 728 ntBASIC20.95■□□□□ 0.94
Trav8n-2A0A075B633 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trav8n-2A0A075B633 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.95■□□□□ 0.94
Trav8n-2A0A075B633 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.94■□□□□ 0.94
Trav8n-2A0A075B633 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.94■□□□□ 0.94
Trav8n-2A0A075B633 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav8n-2A0A075B633 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.94■□□□□ 0.94
Trav8n-2A0A075B633 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Trav8n-2A0A075B633 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav8n-2A0A075B633 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Trav8n-2A0A075B633 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.92■□□□□ 0.94
Trav8n-2A0A075B633 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav8n-2A0A075B633 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trav8n-2A0A075B633 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.92■□□□□ 0.94
Trav8n-2A0A075B633 Gm45444-201ENSMUST00000211394 898 ntBASIC20.91■□□□□ 0.94
Trav8n-2A0A075B633 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav8n-2A0A075B633 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms