Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav7n-4A0A075B620 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav7n-4A0A075B620 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7n-4A0A075B620 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7n-4A0A075B620 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7n-4A0A075B620 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7n-4A0A075B620 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7n-4A0A075B620 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7n-4A0A075B620 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7n-4A0A075B620 Particl-201ENSMUST00000205370 1560 ntBASIC17.25■□□□□ 0.35
Trav7n-4A0A075B620 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7n-4A0A075B620 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7n-4A0A075B620 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7n-4A0A075B620 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7n-4A0A075B620 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7n-4A0A075B620 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7n-4A0A075B620 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7n-4A0A075B620 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7n-4A0A075B620 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7n-4A0A075B620 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav7n-4A0A075B620 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7n-4A0A075B620 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav7n-4A0A075B620 Gm26115-201ENSMUST00000175605 87 ntBASIC17.21■□□□□ 0.35
Trav7n-4A0A075B620 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Trav7n-4A0A075B620 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7n-4A0A075B620 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7n-4A0A075B620 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7n-4A0A075B620 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7n-4A0A075B620 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7n-4A0A075B620 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav7n-4A0A075B620 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7n-4A0A075B620 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7n-4A0A075B620 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7n-4A0A075B620 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7n-4A0A075B620 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trav7n-4A0A075B620 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7n-4A0A075B620 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav7n-4A0A075B620 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7n-4A0A075B620 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7n-4A0A075B620 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7n-4A0A075B620 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-4A0A075B620 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.17■□□□□ 0.34
Trav7n-4A0A075B620 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-4A0A075B620 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-4A0A075B620 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-4A0A075B620 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-4A0A075B620 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-4A0A075B620 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-4A0A075B620 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav7n-4A0A075B620 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav7n-4A0A075B620 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7n-4A0A075B620 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7n-4A0A075B620 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7n-4A0A075B620 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav7n-4A0A075B620 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-4A0A075B620 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-4A0A075B620 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-4A0A075B620 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-4A0A075B620 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-4A0A075B620 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-4A0A075B620 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav7n-4A0A075B620 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-4A0A075B620 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-4A0A075B620 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-4A0A075B620 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-4A0A075B620 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-4A0A075B620 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.12■□□□□ 0.33
Trav7n-4A0A075B620 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-4A0A075B620 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav7n-4A0A075B620 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-4A0A075B620 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav7n-4A0A075B620 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-4A0A075B620 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-4A0A075B620 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.12■□□□□ 0.33
Trav7n-4A0A075B620 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7n-4A0A075B620 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7n-4A0A075B620 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trav7n-4A0A075B620 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7n-4A0A075B620 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7n-4A0A075B620 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms