Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav16d-dv11A0A075B617 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16d-dv11A0A075B617 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.68■□□□□ 0.26
Trav16d-dv11A0A075B617 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav16d-dv11A0A075B617 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16d-dv11A0A075B617 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav16d-dv11A0A075B617 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16d-dv11A0A075B617 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16d-dv11A0A075B617 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16d-dv11A0A075B617 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav16d-dv11A0A075B617 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav16d-dv11A0A075B617 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav16d-dv11A0A075B617 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav16d-dv11A0A075B617 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav16d-dv11A0A075B617 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.66■□□□□ 0.26
Trav16d-dv11A0A075B617 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.66■□□□□ 0.26
Trav16d-dv11A0A075B617 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav16d-dv11A0A075B617 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16d-dv11A0A075B617 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16d-dv11A0A075B617 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav16d-dv11A0A075B617 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Trav16d-dv11A0A075B617 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trav16d-dv11A0A075B617 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trav16d-dv11A0A075B617 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Trav16d-dv11A0A075B617 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16d-dv11A0A075B617 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16d-dv11A0A075B617 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav16d-dv11A0A075B617 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16d-dv11A0A075B617 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav16d-dv11A0A075B617 Particl-201ENSMUST00000205370 1560 ntBASIC16.64■□□□□ 0.25
Trav16d-dv11A0A075B617 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav16d-dv11A0A075B617 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16d-dv11A0A075B617 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16d-dv11A0A075B617 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav16d-dv11A0A075B617 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16d-dv11A0A075B617 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16d-dv11A0A075B617 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trav16d-dv11A0A075B617 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16d-dv11A0A075B617 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav16d-dv11A0A075B617 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.62■□□□□ 0.25
Trav16d-dv11A0A075B617 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16d-dv11A0A075B617 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16d-dv11A0A075B617 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16d-dv11A0A075B617 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16d-dv11A0A075B617 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16d-dv11A0A075B617 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16d-dv11A0A075B617 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16d-dv11A0A075B617 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav16d-dv11A0A075B617 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16d-dv11A0A075B617 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16d-dv11A0A075B617 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav16d-dv11A0A075B617 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16d-dv11A0A075B617 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16d-dv11A0A075B617 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav16d-dv11A0A075B617 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trav16d-dv11A0A075B617 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16d-dv11A0A075B617 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.6■□□□□ 0.25
Trav16d-dv11A0A075B617 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav16d-dv11A0A075B617 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav16d-dv11A0A075B617 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav16d-dv11A0A075B617 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16d-dv11A0A075B617 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav16d-dv11A0A075B617 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav16d-dv11A0A075B617 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16d-dv11A0A075B617 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16d-dv11A0A075B617 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav16d-dv11A0A075B617 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav16d-dv11A0A075B617 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16d-dv11A0A075B617 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16d-dv11A0A075B617 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav16d-dv11A0A075B617 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16d-dv11A0A075B617 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16d-dv11A0A075B617 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16d-dv11A0A075B617 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav16d-dv11A0A075B617 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav16d-dv11A0A075B617 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav16d-dv11A0A075B617 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16d-dv11A0A075B617 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav16d-dv11A0A075B617 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16d-dv11A0A075B617 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16d-dv11A0A075B617 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16d-dv11A0A075B617 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav16d-dv11A0A075B617 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav16d-dv11A0A075B617 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16d-dv11A0A075B617 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16d-dv11A0A075B617 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16d-dv11A0A075B617 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav16d-dv11A0A075B617 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms