Protein–RNA interactions for Protein: Q6NV83

U2surp, U2 snRNP-associated SURP motif-containing protein, mousemouse

Known RBP Predictions only

Length 1,029 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2surpQ6NV83 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Gm6257-201ENSMUST00000163864 910 ntBASIC20.3■□□□□ 0.84
U2surpQ6NV83 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
U2surpQ6NV83 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2surpQ6NV83 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Gm6089-201ENSMUST00000197666 938 ntBASIC20.3■□□□□ 0.84
U2surpQ6NV83 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2surpQ6NV83 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
U2surpQ6NV83 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.29■□□□□ 0.84
U2surpQ6NV83 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.29■□□□□ 0.84
U2surpQ6NV83 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.29■□□□□ 0.84
U2surpQ6NV83 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2surpQ6NV83 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.28■□□□□ 0.84
U2surpQ6NV83 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Gm7230-201ENSMUST00000173026 815 ntBASIC20.28■□□□□ 0.84
U2surpQ6NV83 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2surpQ6NV83 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.27■□□□□ 0.84
U2surpQ6NV83 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
U2surpQ6NV83 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
U2surpQ6NV83 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
U2surpQ6NV83 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
U2surpQ6NV83 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
U2surpQ6NV83 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms