Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 CR769767.2-201ENST00000622735 460 ntBASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SNAP47Q5SQN1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 PCED1CP-201ENST00000419887 785 ntBASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 GPAT2P1-201ENST00000444924 1672 ntBASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNAP47Q5SQN1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 TREX1-205ENST00000625293 1783 ntBASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 AC125437.2-201ENST00000625180 2167 ntBASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 AC112907.2-201ENST00000448639 330 ntBASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 AC120498.9-201ENST00000339021 3867 ntBASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 AC036111.1-201ENST00000533973 1582 ntBASIC18.17■□□□□ 0.5
SNAP47Q5SQN1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 FAM86EP-206ENST00000510506 987 ntBASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 NEK4P2-201ENST00000580004 1012 ntBASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 AC093458.2-201ENST00000623150 629 ntBASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 AL121956.5-201ENST00000625261 221 ntBASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 AP000550.4-202ENST00000639755 178 ntBASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms