Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Prob1-201ENSMUST00000097619 3021 ntBASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Uspl1Q3ULM6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Gm44616-201ENSMUST00000206417 1732 ntBASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uspl1Q3ULM6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Gm27646-201ENSMUST00000183989 110 ntBASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Rps4l-201ENSMUST00000071745 943 ntBASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uspl1Q3ULM6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uspl1Q3ULM6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Gm25990-201ENSMUST00000102440 86 ntBASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Gm7862-201ENSMUST00000121461 292 ntBASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Gm19164-201ENSMUST00000210667 640 ntBASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Uspl1Q3ULM6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Gm15358-201ENSMUST00000119249 520 ntBASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Gm8344-201ENSMUST00000119813 856 ntBASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Gm5864-201ENSMUST00000202263 970 ntBASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Gm6376-201ENSMUST00000209407 580 ntBASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms