Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm12728V9GX31 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm12728V9GX31 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12728V9GX31 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12728V9GX31 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12728V9GX31 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12728V9GX31 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm12728V9GX31 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12728V9GX31 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm12728V9GX31 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gm12728V9GX31 Particl-201ENSMUST00000205370 1560 ntBASIC18.29■□□□□ 0.52
Gm12728V9GX31 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12728V9GX31 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12728V9GX31 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12728V9GX31 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Gm12728V9GX31 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Gm12728V9GX31 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12728V9GX31 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12728V9GX31 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12728V9GX31 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12728V9GX31 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12728V9GX31 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12728V9GX31 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12728V9GX31 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Gm12728V9GX31 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12728V9GX31 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12728V9GX31 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12728V9GX31 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm12728V9GX31 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12728V9GX31 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12728V9GX31 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12728V9GX31 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12728V9GX31 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm12728V9GX31 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm12728V9GX31 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Gm12728V9GX31 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12728V9GX31 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm12728V9GX31 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12728V9GX31 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12728V9GX31 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12728V9GX31 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12728V9GX31 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.23■□□□□ 0.51
Gm12728V9GX31 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12728V9GX31 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12728V9GX31 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12728V9GX31 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12728V9GX31 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12728V9GX31 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12728V9GX31 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm12728V9GX31 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12728V9GX31 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12728V9GX31 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm12728V9GX31 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm12728V9GX31 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Gm12728V9GX31 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12728V9GX31 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Gm12728V9GX31 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm12728V9GX31 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12728V9GX31 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12728V9GX31 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Gm12728V9GX31 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12728V9GX31 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gm12728V9GX31 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm12728V9GX31 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12728V9GX31 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12728V9GX31 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12728V9GX31 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Gm12728V9GX31 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm12728V9GX31 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12728V9GX31 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12728V9GX31 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12728V9GX31 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12728V9GX31 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12728V9GX31 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12728V9GX31 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12728V9GX31 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Gm12728V9GX31 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Gm12728V9GX31 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm12728V9GX31 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12728V9GX31 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12728V9GX31 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gm12728V9GX31 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Gm12728V9GX31 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Gm12728V9GX31 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12728V9GX31 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12728V9GX31 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12728V9GX31 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12728V9GX31 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm12728V9GX31 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12728V9GX31 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12728V9GX31 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12728V9GX31 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm12728V9GX31 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12728V9GX31 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12728V9GX31 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12728V9GX31 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Gm12728V9GX31 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Gm12728V9GX31 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm12728V9GX31 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm12728V9GX31 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms