Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn13Q9Z0S4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.45■□□□□ 0.86
Cldn13Q9Z0S4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn13Q9Z0S4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn13Q9Z0S4 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.44■□□□□ 0.86
Cldn13Q9Z0S4 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.44■□□□□ 0.86
Cldn13Q9Z0S4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn13Q9Z0S4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn13Q9Z0S4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cldn13Q9Z0S4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn13Q9Z0S4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cldn13Q9Z0S4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.43■□□□□ 0.86
Cldn13Q9Z0S4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cldn13Q9Z0S4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn13Q9Z0S4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn13Q9Z0S4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn13Q9Z0S4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cldn13Q9Z0S4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cldn13Q9Z0S4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cldn13Q9Z0S4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn13Q9Z0S4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn13Q9Z0S4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn13Q9Z0S4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cldn13Q9Z0S4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn13Q9Z0S4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn13Q9Z0S4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cldn13Q9Z0S4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Cldn13Q9Z0S4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn13Q9Z0S4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cldn13Q9Z0S4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn13Q9Z0S4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cldn13Q9Z0S4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn13Q9Z0S4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.37■□□□□ 0.85
Cldn13Q9Z0S4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn13Q9Z0S4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn13Q9Z0S4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cldn13Q9Z0S4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn13Q9Z0S4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn13Q9Z0S4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn13Q9Z0S4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn13Q9Z0S4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn13Q9Z0S4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn13Q9Z0S4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn13Q9Z0S4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn13Q9Z0S4 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.35■□□□□ 0.85
Cldn13Q9Z0S4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn13Q9Z0S4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cldn13Q9Z0S4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn13Q9Z0S4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cldn13Q9Z0S4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.31■□□□□ 0.84
Cldn13Q9Z0S4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn13Q9Z0S4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cldn13Q9Z0S4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn13Q9Z0S4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn13Q9Z0S4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn13Q9Z0S4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn13Q9Z0S4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn13Q9Z0S4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.29■□□□□ 0.84
Cldn13Q9Z0S4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn13Q9Z0S4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn13Q9Z0S4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cldn13Q9Z0S4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn13Q9Z0S4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn13Q9Z0S4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn13Q9Z0S4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn13Q9Z0S4 Gm37136-201ENSMUST00000194368 194 ntBASIC20.28■□□□□ 0.84
Cldn13Q9Z0S4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn13Q9Z0S4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cldn13Q9Z0S4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cldn13Q9Z0S4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn13Q9Z0S4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn13Q9Z0S4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn13Q9Z0S4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cldn13Q9Z0S4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.26■□□□□ 0.83
Cldn13Q9Z0S4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cldn13Q9Z0S4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cldn13Q9Z0S4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn13Q9Z0S4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn13Q9Z0S4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.25■□□□□ 0.83
Cldn13Q9Z0S4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn13Q9Z0S4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn13Q9Z0S4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.24■□□□□ 0.83
Cldn13Q9Z0S4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cldn13Q9Z0S4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn13Q9Z0S4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Cldn13Q9Z0S4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn13Q9Z0S4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn13Q9Z0S4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn13Q9Z0S4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cldn13Q9Z0S4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.22■□□□□ 0.83
Cldn13Q9Z0S4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn13Q9Z0S4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn13Q9Z0S4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Cldn13Q9Z0S4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn13Q9Z0S4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn13Q9Z0S4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.2■□□□□ 0.82
Cldn13Q9Z0S4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn13Q9Z0S4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn13Q9Z0S4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cldn13Q9Z0S4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms