Protein–RNA interactions for Protein: Q9EPS9

Vmn1r56, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r56Q9EPS9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r56Q9EPS9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r56Q9EPS9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r56Q9EPS9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r56Q9EPS9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Vmn1r56Q9EPS9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r56Q9EPS9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r56Q9EPS9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Vmn1r56Q9EPS9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Vmn1r56Q9EPS9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r56Q9EPS9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.45■□□□□ 0.86
Vmn1r56Q9EPS9 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.45■□□□□ 0.86
Vmn1r56Q9EPS9 Gm7432-201ENSMUST00000210343 879 ntBASIC20.45■□□□□ 0.86
Vmn1r56Q9EPS9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r56Q9EPS9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r56Q9EPS9 Particl-201ENSMUST00000205370 1560 ntBASIC20.44■□□□□ 0.86
Vmn1r56Q9EPS9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r56Q9EPS9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r56Q9EPS9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r56Q9EPS9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r56Q9EPS9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r56Q9EPS9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Vmn1r56Q9EPS9 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.43■□□□□ 0.86
Vmn1r56Q9EPS9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r56Q9EPS9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r56Q9EPS9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Vmn1r56Q9EPS9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.41■□□□□ 0.86
Vmn1r56Q9EPS9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r56Q9EPS9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r56Q9EPS9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.4■□□□□ 0.86
Vmn1r56Q9EPS9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.4■□□□□ 0.86
Vmn1r56Q9EPS9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r56Q9EPS9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Vmn1r56Q9EPS9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r56Q9EPS9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r56Q9EPS9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r56Q9EPS9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r56Q9EPS9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r56Q9EPS9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.37■□□□□ 0.85
Vmn1r56Q9EPS9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r56Q9EPS9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r56Q9EPS9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.36■□□□□ 0.85
Vmn1r56Q9EPS9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vmn1r56Q9EPS9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Vmn1r56Q9EPS9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Vmn1r56Q9EPS9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.35■□□□□ 0.85
Vmn1r56Q9EPS9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r56Q9EPS9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r56Q9EPS9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r56Q9EPS9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r56Q9EPS9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r56Q9EPS9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
Vmn1r56Q9EPS9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vmn1r56Q9EPS9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vmn1r56Q9EPS9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r56Q9EPS9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r56Q9EPS9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r56Q9EPS9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.32■□□□□ 0.84
Vmn1r56Q9EPS9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Vmn1r56Q9EPS9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r56Q9EPS9 Gm11599-201ENSMUST00000118720 878 ntBASIC20.31■□□□□ 0.84
Vmn1r56Q9EPS9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r56Q9EPS9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r56Q9EPS9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r56Q9EPS9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r56Q9EPS9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r56Q9EPS9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r56Q9EPS9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r56Q9EPS9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r56Q9EPS9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.29■□□□□ 0.84
Vmn1r56Q9EPS9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
Vmn1r56Q9EPS9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r56Q9EPS9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r56Q9EPS9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Vmn1r56Q9EPS9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r56Q9EPS9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r56Q9EPS9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r56Q9EPS9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r56Q9EPS9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r56Q9EPS9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r56Q9EPS9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r56Q9EPS9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r56Q9EPS9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vmn1r56Q9EPS9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r56Q9EPS9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.26■□□□□ 0.83
Vmn1r56Q9EPS9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r56Q9EPS9 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.26■□□□□ 0.83
Vmn1r56Q9EPS9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Vmn1r56Q9EPS9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r56Q9EPS9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Vmn1r56Q9EPS9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r56Q9EPS9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r56Q9EPS9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.25■□□□□ 0.83
Vmn1r56Q9EPS9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.24■□□□□ 0.83
Vmn1r56Q9EPS9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Vmn1r56Q9EPS9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vmn1r56Q9EPS9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.24■□□□□ 0.83
Vmn1r56Q9EPS9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r56Q9EPS9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vmn1r56Q9EPS9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms