Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem54Q9D7S1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tmem54Q9D7S1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmem54Q9D7S1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.18■□□□□ 0.82
Tmem54Q9D7S1 Mir3960-201ENSMUST00000198213 73 ntBASIC20.18■□□□□ 0.82
Tmem54Q9D7S1 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.18■□□□□ 0.82
Tmem54Q9D7S1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmem54Q9D7S1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tmem54Q9D7S1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tmem54Q9D7S1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tmem54Q9D7S1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tmem54Q9D7S1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.15■□□□□ 0.82
Tmem54Q9D7S1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.15■□□□□ 0.82
Tmem54Q9D7S1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Tmem54Q9D7S1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmem54Q9D7S1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tmem54Q9D7S1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tmem54Q9D7S1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmem54Q9D7S1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tmem54Q9D7S1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.14■□□□□ 0.81
Tmem54Q9D7S1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmem54Q9D7S1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmem54Q9D7S1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmem54Q9D7S1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tmem54Q9D7S1 Gm45364-201ENSMUST00000210883 159 ntBASIC20.13■□□□□ 0.81
Tmem54Q9D7S1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tmem54Q9D7S1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tmem54Q9D7S1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.12■□□□□ 0.81
Tmem54Q9D7S1 Gm6311-201ENSMUST00000073790 878 ntBASIC20.12■□□□□ 0.81
Tmem54Q9D7S1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tmem54Q9D7S1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tmem54Q9D7S1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.11■□□□□ 0.81
Tmem54Q9D7S1 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.11■□□□□ 0.81
Tmem54Q9D7S1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tmem54Q9D7S1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tmem54Q9D7S1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tmem54Q9D7S1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.1■□□□□ 0.81
Tmem54Q9D7S1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tmem54Q9D7S1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Tmem54Q9D7S1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.09■□□□□ 0.81
Tmem54Q9D7S1 Gm9812-201ENSMUST00000061934 968 ntBASIC20.09■□□□□ 0.81
Tmem54Q9D7S1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tmem54Q9D7S1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tmem54Q9D7S1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tmem54Q9D7S1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tmem54Q9D7S1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tmem54Q9D7S1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Tmem54Q9D7S1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tmem54Q9D7S1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tmem54Q9D7S1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tmem54Q9D7S1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tmem54Q9D7S1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tmem54Q9D7S1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tmem54Q9D7S1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tmem54Q9D7S1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tmem54Q9D7S1 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.06■□□□□ 0.8
Tmem54Q9D7S1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Tmem54Q9D7S1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tmem54Q9D7S1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tmem54Q9D7S1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.05■□□□□ 0.8
Tmem54Q9D7S1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tmem54Q9D7S1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tmem54Q9D7S1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tmem54Q9D7S1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tmem54Q9D7S1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tmem54Q9D7S1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tmem54Q9D7S1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.04■□□□□ 0.8
Tmem54Q9D7S1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.04■□□□□ 0.8
Tmem54Q9D7S1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.04■□□□□ 0.8
Tmem54Q9D7S1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tmem54Q9D7S1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Tmem54Q9D7S1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tmem54Q9D7S1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tmem54Q9D7S1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tmem54Q9D7S1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tmem54Q9D7S1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Tmem54Q9D7S1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tmem54Q9D7S1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tmem54Q9D7S1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Tmem54Q9D7S1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Tmem54Q9D7S1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tmem54Q9D7S1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tmem54Q9D7S1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tmem54Q9D7S1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tmem54Q9D7S1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tmem54Q9D7S1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tmem54Q9D7S1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tmem54Q9D7S1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tmem54Q9D7S1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Tmem54Q9D7S1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tmem54Q9D7S1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tmem54Q9D7S1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tmem54Q9D7S1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tmem54Q9D7S1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tmem54Q9D7S1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.98■□□□□ 0.79
Tmem54Q9D7S1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tmem54Q9D7S1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Tmem54Q9D7S1 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.98■□□□□ 0.79
Tmem54Q9D7S1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tmem54Q9D7S1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms