Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sft2d3Q9CSV6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sft2d3Q9CSV6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sft2d3Q9CSV6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sft2d3Q9CSV6 Gm6311-201ENSMUST00000073790 878 ntBASIC19.38■□□□□ 0.69
Sft2d3Q9CSV6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sft2d3Q9CSV6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.37■□□□□ 0.69
Sft2d3Q9CSV6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sft2d3Q9CSV6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sft2d3Q9CSV6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Sft2d3Q9CSV6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.36■□□□□ 0.69
Sft2d3Q9CSV6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sft2d3Q9CSV6 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.36■□□□□ 0.69
Sft2d3Q9CSV6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sft2d3Q9CSV6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Sft2d3Q9CSV6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sft2d3Q9CSV6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Sft2d3Q9CSV6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sft2d3Q9CSV6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sft2d3Q9CSV6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sft2d3Q9CSV6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sft2d3Q9CSV6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.34■□□□□ 0.69
Sft2d3Q9CSV6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sft2d3Q9CSV6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sft2d3Q9CSV6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sft2d3Q9CSV6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sft2d3Q9CSV6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sft2d3Q9CSV6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sft2d3Q9CSV6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
Sft2d3Q9CSV6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sft2d3Q9CSV6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sft2d3Q9CSV6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Sft2d3Q9CSV6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sft2d3Q9CSV6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sft2d3Q9CSV6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sft2d3Q9CSV6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.3■□□□□ 0.68
Sft2d3Q9CSV6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sft2d3Q9CSV6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sft2d3Q9CSV6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sft2d3Q9CSV6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sft2d3Q9CSV6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.3■□□□□ 0.68
Sft2d3Q9CSV6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sft2d3Q9CSV6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sft2d3Q9CSV6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sft2d3Q9CSV6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Sft2d3Q9CSV6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.29■□□□□ 0.68
Sft2d3Q9CSV6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Sft2d3Q9CSV6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.29■□□□□ 0.68
Sft2d3Q9CSV6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sft2d3Q9CSV6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sft2d3Q9CSV6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sft2d3Q9CSV6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Sft2d3Q9CSV6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sft2d3Q9CSV6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sft2d3Q9CSV6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sft2d3Q9CSV6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sft2d3Q9CSV6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sft2d3Q9CSV6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sft2d3Q9CSV6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sft2d3Q9CSV6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.27■□□□□ 0.68
Sft2d3Q9CSV6 Mir6538-201ENSMUST00000183713 110 ntBASIC19.27■□□□□ 0.68
Sft2d3Q9CSV6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sft2d3Q9CSV6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.26■□□□□ 0.67
Sft2d3Q9CSV6 Gm4799-201ENSMUST00000095396 657 ntBASIC19.26■□□□□ 0.67
Sft2d3Q9CSV6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sft2d3Q9CSV6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sft2d3Q9CSV6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sft2d3Q9CSV6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sft2d3Q9CSV6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sft2d3Q9CSV6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Sft2d3Q9CSV6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sft2d3Q9CSV6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sft2d3Q9CSV6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sft2d3Q9CSV6 Gm11175-201ENSMUST00000116172 543 ntBASIC19.24■□□□□ 0.67
Sft2d3Q9CSV6 Gm37136-201ENSMUST00000194368 194 ntBASIC19.24■□□□□ 0.67
Sft2d3Q9CSV6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sft2d3Q9CSV6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sft2d3Q9CSV6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.23■□□□□ 0.67
Sft2d3Q9CSV6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sft2d3Q9CSV6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sft2d3Q9CSV6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sft2d3Q9CSV6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sft2d3Q9CSV6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sft2d3Q9CSV6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sft2d3Q9CSV6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sft2d3Q9CSV6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.22■□□□□ 0.67
Sft2d3Q9CSV6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sft2d3Q9CSV6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sft2d3Q9CSV6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sft2d3Q9CSV6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.21■□□□□ 0.67
Sft2d3Q9CSV6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sft2d3Q9CSV6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sft2d3Q9CSV6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sft2d3Q9CSV6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sft2d3Q9CSV6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sft2d3Q9CSV6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sft2d3Q9CSV6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sft2d3Q9CSV6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.18■□□□□ 0.66
Sft2d3Q9CSV6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sft2d3Q9CSV6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms