Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.72■□□□□ 0.59
Rer1Q9CQU3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rer1Q9CQU3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rer1Q9CQU3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rer1Q9CQU3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.71■□□□□ 0.59
Rer1Q9CQU3 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.71■□□□□ 0.59
Rer1Q9CQU3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rer1Q9CQU3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rer1Q9CQU3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Rer1Q9CQU3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rer1Q9CQU3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rer1Q9CQU3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rer1Q9CQU3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.69■□□□□ 0.58
Rer1Q9CQU3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rer1Q9CQU3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rer1Q9CQU3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rer1Q9CQU3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.68■□□□□ 0.58
Rer1Q9CQU3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rer1Q9CQU3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rer1Q9CQU3 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.68■□□□□ 0.58
Rer1Q9CQU3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rer1Q9CQU3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rer1Q9CQU3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rer1Q9CQU3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rer1Q9CQU3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rer1Q9CQU3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rer1Q9CQU3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rer1Q9CQU3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rer1Q9CQU3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rer1Q9CQU3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rer1Q9CQU3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rer1Q9CQU3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rer1Q9CQU3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rer1Q9CQU3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rer1Q9CQU3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rer1Q9CQU3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.65■□□□□ 0.58
Rer1Q9CQU3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rer1Q9CQU3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rer1Q9CQU3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rer1Q9CQU3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rer1Q9CQU3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rer1Q9CQU3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rer1Q9CQU3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.64■□□□□ 0.57
Rer1Q9CQU3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rer1Q9CQU3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rer1Q9CQU3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rer1Q9CQU3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.63■□□□□ 0.57
Rer1Q9CQU3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rer1Q9CQU3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rer1Q9CQU3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rer1Q9CQU3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rer1Q9CQU3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rer1Q9CQU3 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.61■□□□□ 0.57
Rer1Q9CQU3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rer1Q9CQU3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rer1Q9CQU3 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.6■□□□□ 0.57
Rer1Q9CQU3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.6■□□□□ 0.57
Rer1Q9CQU3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rer1Q9CQU3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rer1Q9CQU3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rer1Q9CQU3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rer1Q9CQU3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rer1Q9CQU3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rer1Q9CQU3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rer1Q9CQU3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rer1Q9CQU3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rer1Q9CQU3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rer1Q9CQU3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.57■□□□□ 0.56
Rer1Q9CQU3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rer1Q9CQU3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.57■□□□□ 0.56
Rer1Q9CQU3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.57■□□□□ 0.56
Rer1Q9CQU3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rer1Q9CQU3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rer1Q9CQU3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rer1Q9CQU3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rer1Q9CQU3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rer1Q9CQU3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rer1Q9CQU3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rer1Q9CQU3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rer1Q9CQU3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rer1Q9CQU3 Gm6821-201ENSMUST00000107540 542 ntBASIC18.55■□□□□ 0.56
Rer1Q9CQU3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rer1Q9CQU3 Gm37136-201ENSMUST00000194368 194 ntBASIC18.54■□□□□ 0.56
Rer1Q9CQU3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.54■□□□□ 0.56
Rer1Q9CQU3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rer1Q9CQU3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rer1Q9CQU3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rer1Q9CQU3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rer1Q9CQU3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.53■□□□□ 0.56
Rer1Q9CQU3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
Rer1Q9CQU3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rer1Q9CQU3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rer1Q9CQU3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Rer1Q9CQU3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rer1Q9CQU3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.52■□□□□ 0.56
Rer1Q9CQU3 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.52■□□□□ 0.56
Rer1Q9CQU3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rer1Q9CQU3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rer1Q9CQU3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.51■□□□□ 0.55
Rer1Q9CQU3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms