Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Cdh23Q99PF4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cdh23Q99PF4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cdh23Q99PF4 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.38■■□□□ 1.49
Cdh23Q99PF4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cdh23Q99PF4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cdh23Q99PF4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Cdh23Q99PF4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.36■■□□□ 1.49
Cdh23Q99PF4 Serp2-204ENSMUST00000228055 705 ntBASIC24.36■■□□□ 1.49
Cdh23Q99PF4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.36■■□□□ 1.49
Cdh23Q99PF4 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.35■■□□□ 1.49
Cdh23Q99PF4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cdh23Q99PF4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.35■■□□□ 1.49
Cdh23Q99PF4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.34■■□□□ 1.49
Cdh23Q99PF4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Cdh23Q99PF4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Cdh23Q99PF4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cdh23Q99PF4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Cdh23Q99PF4 Gm9812-201ENSMUST00000061934 968 ntBASIC24.33■■□□□ 1.49
Cdh23Q99PF4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cdh23Q99PF4 Gm13238-201ENSMUST00000117655 780 ntBASIC24.32■■□□□ 1.48
Cdh23Q99PF4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Cdh23Q99PF4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Cdh23Q99PF4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cdh23Q99PF4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cdh23Q99PF4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Cdh23Q99PF4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cdh23Q99PF4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cdh23Q99PF4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Cdh23Q99PF4 Gm37136-201ENSMUST00000194368 194 ntBASIC24.29■■□□□ 1.48
Cdh23Q99PF4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Cdh23Q99PF4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cdh23Q99PF4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Cdh23Q99PF4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Cdh23Q99PF4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cdh23Q99PF4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cdh23Q99PF4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.28■■□□□ 1.48
Cdh23Q99PF4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Cdh23Q99PF4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cdh23Q99PF4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.27■■□□□ 1.48
Cdh23Q99PF4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.26■■□□□ 1.47
Cdh23Q99PF4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cdh23Q99PF4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cdh23Q99PF4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.26■■□□□ 1.47
Cdh23Q99PF4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.25■■□□□ 1.47
Cdh23Q99PF4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Cdh23Q99PF4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.25■■□□□ 1.47
Cdh23Q99PF4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cdh23Q99PF4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Cdh23Q99PF4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.23■■□□□ 1.47
Cdh23Q99PF4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Cdh23Q99PF4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cdh23Q99PF4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cdh23Q99PF4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cdh23Q99PF4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cdh23Q99PF4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
Cdh23Q99PF4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.2■■□□□ 1.46
Cdh23Q99PF4 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.2■■□□□ 1.46
Cdh23Q99PF4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cdh23Q99PF4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cdh23Q99PF4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cdh23Q99PF4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cdh23Q99PF4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cdh23Q99PF4 Gm43566-201ENSMUST00000196851 808 ntBASIC24.18■■□□□ 1.46
Cdh23Q99PF4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cdh23Q99PF4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cdh23Q99PF4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Cdh23Q99PF4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cdh23Q99PF4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cdh23Q99PF4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cdh23Q99PF4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cdh23Q99PF4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.16■■□□□ 1.46
Cdh23Q99PF4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
Cdh23Q99PF4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cdh23Q99PF4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cdh23Q99PF4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.15■■□□□ 1.46
Cdh23Q99PF4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.14■■□□□ 1.46
Cdh23Q99PF4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cdh23Q99PF4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Cdh23Q99PF4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cdh23Q99PF4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.14■■□□□ 1.45
Cdh23Q99PF4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Cdh23Q99PF4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Cdh23Q99PF4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cdh23Q99PF4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cdh23Q99PF4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cdh23Q99PF4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.12■■□□□ 1.45
Cdh23Q99PF4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Cdh23Q99PF4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cdh23Q99PF4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cdh23Q99PF4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.11■■□□□ 1.45
Cdh23Q99PF4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cdh23Q99PF4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Cdh23Q99PF4 Gm9959-201ENSMUST00000068277 390 ntBASIC24.11■■□□□ 1.45
Cdh23Q99PF4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.1■■□□□ 1.45
Cdh23Q99PF4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.09■■□□□ 1.45
Cdh23Q99PF4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cdh23Q99PF4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Cdh23Q99PF4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Cdh23Q99PF4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms