Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.6■■■□□ 2.01
Pcdhb5Q91XZ5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
Pcdhb5Q91XZ5 Gm14523-201ENSMUST00000117260 558 ntBASIC27.59■■■□□ 2.01
Pcdhb5Q91XZ5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pcdhb5Q91XZ5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pcdhb5Q91XZ5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Pcdhb5Q91XZ5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.58■■■□□ 2
Pcdhb5Q91XZ5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.57■■■□□ 2
Pcdhb5Q91XZ5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.57■■■□□ 2
Pcdhb5Q91XZ5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC27.56■■■□□ 2
Pcdhb5Q91XZ5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.56■■■□□ 2
Pcdhb5Q91XZ5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.56■■■□□ 2
Pcdhb5Q91XZ5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Pcdhb5Q91XZ5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.56■■■□□ 2
Pcdhb5Q91XZ5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.56■■■□□ 2
Pcdhb5Q91XZ5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
Pcdhb5Q91XZ5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Pcdhb5Q91XZ5 AC153911.1-201ENSMUST00000220378 758 ntBASIC27.54■■■□□ 2
Pcdhb5Q91XZ5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC27.54■■■□□ 2
Pcdhb5Q91XZ5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.53■■■□□ 2
Pcdhb5Q91XZ5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pcdhb5Q91XZ5 Terc-201ENSMUST00000082862 423 ntBASIC27.51■■□□□ 1.99
Pcdhb5Q91XZ5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
Pcdhb5Q91XZ5 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.5■■□□□ 1.99
Pcdhb5Q91XZ5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
Pcdhb5Q91XZ5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Pcdhb5Q91XZ5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdhb5Q91XZ5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdhb5Q91XZ5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdhb5Q91XZ5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhb5Q91XZ5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdhb5Q91XZ5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdhb5Q91XZ5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdhb5Q91XZ5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.47■■□□□ 1.99
Pcdhb5Q91XZ5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdhb5Q91XZ5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.46■■□□□ 1.99
Pcdhb5Q91XZ5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdhb5Q91XZ5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Pcdhb5Q91XZ5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.45■■□□□ 1.99
Pcdhb5Q91XZ5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
Pcdhb5Q91XZ5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Pcdhb5Q91XZ5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.45■■□□□ 1.98
Pcdhb5Q91XZ5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Pcdhb5Q91XZ5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.44■■□□□ 1.98
Pcdhb5Q91XZ5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhb5Q91XZ5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Pcdhb5Q91XZ5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhb5Q91XZ5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhb5Q91XZ5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.42■■□□□ 1.98
Pcdhb5Q91XZ5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.42■■□□□ 1.98
Pcdhb5Q91XZ5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Pcdhb5Q91XZ5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdhb5Q91XZ5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Pcdhb5Q91XZ5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.41■■□□□ 1.98
Pcdhb5Q91XZ5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhb5Q91XZ5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhb5Q91XZ5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Pcdhb5Q91XZ5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pcdhb5Q91XZ5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.4■■□□□ 1.98
Pcdhb5Q91XZ5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.4■■□□□ 1.98
Pcdhb5Q91XZ5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
Pcdhb5Q91XZ5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Pcdhb5Q91XZ5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Pcdhb5Q91XZ5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdhb5Q91XZ5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdhb5Q91XZ5 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.37■■□□□ 1.97
Pcdhb5Q91XZ5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdhb5Q91XZ5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdhb5Q91XZ5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdhb5Q91XZ5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdhb5Q91XZ5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdhb5Q91XZ5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.36■■□□□ 1.97
Pcdhb5Q91XZ5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.35■■□□□ 1.97
Pcdhb5Q91XZ5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.35■■□□□ 1.97
Pcdhb5Q91XZ5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhb5Q91XZ5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhb5Q91XZ5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdhb5Q91XZ5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdhb5Q91XZ5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdhb5Q91XZ5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.33■■□□□ 1.97
Pcdhb5Q91XZ5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdhb5Q91XZ5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhb5Q91XZ5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhb5Q91XZ5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhb5Q91XZ5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhb5Q91XZ5 Gm10420-201ENSMUST00000121713 882 ntBASIC27.31■■□□□ 1.96
Pcdhb5Q91XZ5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdhb5Q91XZ5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdhb5Q91XZ5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdhb5Q91XZ5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdhb5Q91XZ5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdhb5Q91XZ5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdhb5Q91XZ5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdhb5Q91XZ5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.27■■□□□ 1.96
Pcdhb5Q91XZ5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.27■■□□□ 1.96
Pcdhb5Q91XZ5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Pcdhb5Q91XZ5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Pcdhb5Q91XZ5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Pcdhb5Q91XZ5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Pcdhb5Q91XZ5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms