Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgc3Q91XX1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdhgc3Q91XX1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgc3Q91XX1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdhgc3Q91XX1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgc3Q91XX1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgc3Q91XX1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgc3Q91XX1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhgc3Q91XX1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhgc3Q91XX1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Pcdhgc3Q91XX1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgc3Q91XX1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgc3Q91XX1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgc3Q91XX1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhgc3Q91XX1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgc3Q91XX1 Zfp131-205ENSMUST00000223812 663 ntBASIC21.65■■□□□ 1.06
Pcdhgc3Q91XX1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhgc3Q91XX1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgc3Q91XX1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhgc3Q91XX1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhgc3Q91XX1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdhgc3Q91XX1 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.63■■□□□ 1.05
Pcdhgc3Q91XX1 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.63■■□□□ 1.05
Pcdhgc3Q91XX1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgc3Q91XX1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhgc3Q91XX1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhgc3Q91XX1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhgc3Q91XX1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgc3Q91XX1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgc3Q91XX1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgc3Q91XX1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhgc3Q91XX1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgc3Q91XX1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.59■■□□□ 1.05
Pcdhgc3Q91XX1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgc3Q91XX1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.59■■□□□ 1.05
Pcdhgc3Q91XX1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhgc3Q91XX1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgc3Q91XX1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.59■■□□□ 1.05
Pcdhgc3Q91XX1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgc3Q91XX1 Particl-201ENSMUST00000205370 1560 ntBASIC21.58■■□□□ 1.05
Pcdhgc3Q91XX1 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.58■■□□□ 1.05
Pcdhgc3Q91XX1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgc3Q91XX1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgc3Q91XX1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhgc3Q91XX1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc3Q91XX1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc3Q91XX1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdhgc3Q91XX1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.57■■□□□ 1.04
Pcdhgc3Q91XX1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhgc3Q91XX1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhgc3Q91XX1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgc3Q91XX1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhgc3Q91XX1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgc3Q91XX1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgc3Q91XX1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdhgc3Q91XX1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhgc3Q91XX1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhgc3Q91XX1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgc3Q91XX1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgc3Q91XX1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhgc3Q91XX1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgc3Q91XX1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgc3Q91XX1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdhgc3Q91XX1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Pcdhgc3Q91XX1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgc3Q91XX1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgc3Q91XX1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgc3Q91XX1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgc3Q91XX1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgc3Q91XX1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgc3Q91XX1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgc3Q91XX1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdhgc3Q91XX1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdhgc3Q91XX1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgc3Q91XX1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgc3Q91XX1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgc3Q91XX1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgc3Q91XX1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgc3Q91XX1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgc3Q91XX1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgc3Q91XX1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgc3Q91XX1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgc3Q91XX1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgc3Q91XX1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgc3Q91XX1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgc3Q91XX1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhgc3Q91XX1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgc3Q91XX1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhgc3Q91XX1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhgc3Q91XX1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgc3Q91XX1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgc3Q91XX1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgc3Q91XX1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgc3Q91XX1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgc3Q91XX1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhgc3Q91XX1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgc3Q91XX1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgc3Q91XX1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgc3Q91XX1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhgc3Q91XX1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms