Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.33■■□□□ 1.16
Rpusd1Q8VCZ8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Rpusd1Q8VCZ8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rpusd1Q8VCZ8 Gm7332-201ENSMUST00000118351 454 ntBASIC22.31■■□□□ 1.16
Rpusd1Q8VCZ8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rpusd1Q8VCZ8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rpusd1Q8VCZ8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Rpusd1Q8VCZ8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rpusd1Q8VCZ8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Rpusd1Q8VCZ8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rpusd1Q8VCZ8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rpusd1Q8VCZ8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rpusd1Q8VCZ8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpusd1Q8VCZ8 Gm14523-201ENSMUST00000117260 558 ntBASIC22.28■■□□□ 1.16
Rpusd1Q8VCZ8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpusd1Q8VCZ8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rpusd1Q8VCZ8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rpusd1Q8VCZ8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rpusd1Q8VCZ8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rpusd1Q8VCZ8 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.26■■□□□ 1.15
Rpusd1Q8VCZ8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rpusd1Q8VCZ8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rpusd1Q8VCZ8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.25■■□□□ 1.15
Rpusd1Q8VCZ8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.25■■□□□ 1.15
Rpusd1Q8VCZ8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rpusd1Q8VCZ8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rpusd1Q8VCZ8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rpusd1Q8VCZ8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.24■■□□□ 1.15
Rpusd1Q8VCZ8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rpusd1Q8VCZ8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rpusd1Q8VCZ8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rpusd1Q8VCZ8 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.23■■□□□ 1.15
Rpusd1Q8VCZ8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rpusd1Q8VCZ8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rpusd1Q8VCZ8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rpusd1Q8VCZ8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.22■■□□□ 1.15
Rpusd1Q8VCZ8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.21■■□□□ 1.15
Rpusd1Q8VCZ8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.21■■□□□ 1.15
Rpusd1Q8VCZ8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rpusd1Q8VCZ8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rpusd1Q8VCZ8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rpusd1Q8VCZ8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rpusd1Q8VCZ8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.2■■□□□ 1.14
Rpusd1Q8VCZ8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.2■■□□□ 1.14
Rpusd1Q8VCZ8 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.2■■□□□ 1.14
Rpusd1Q8VCZ8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Rpusd1Q8VCZ8 Terc-201ENSMUST00000082862 423 ntBASIC22.2■■□□□ 1.14
Rpusd1Q8VCZ8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rpusd1Q8VCZ8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rpusd1Q8VCZ8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Rpusd1Q8VCZ8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Rpusd1Q8VCZ8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rpusd1Q8VCZ8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rpusd1Q8VCZ8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rpusd1Q8VCZ8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rpusd1Q8VCZ8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rpusd1Q8VCZ8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rpusd1Q8VCZ8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Rpusd1Q8VCZ8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rpusd1Q8VCZ8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rpusd1Q8VCZ8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rpusd1Q8VCZ8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rpusd1Q8VCZ8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Rpusd1Q8VCZ8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rpusd1Q8VCZ8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Rpusd1Q8VCZ8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Rpusd1Q8VCZ8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.15■■□□□ 1.14
Rpusd1Q8VCZ8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rpusd1Q8VCZ8 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.14■■□□□ 1.14
Rpusd1Q8VCZ8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rpusd1Q8VCZ8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Rpusd1Q8VCZ8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rpusd1Q8VCZ8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rpusd1Q8VCZ8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rpusd1Q8VCZ8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.13■■□□□ 1.13
Rpusd1Q8VCZ8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.13■■□□□ 1.13
Rpusd1Q8VCZ8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rpusd1Q8VCZ8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Rpusd1Q8VCZ8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rpusd1Q8VCZ8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.12■■□□□ 1.13
Rpusd1Q8VCZ8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rpusd1Q8VCZ8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Rpusd1Q8VCZ8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rpusd1Q8VCZ8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.11■■□□□ 1.13
Rpusd1Q8VCZ8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rpusd1Q8VCZ8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.1■■□□□ 1.13
Rpusd1Q8VCZ8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpusd1Q8VCZ8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpusd1Q8VCZ8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rpusd1Q8VCZ8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rpusd1Q8VCZ8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.09■■□□□ 1.13
Rpusd1Q8VCZ8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rpusd1Q8VCZ8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.09■■□□□ 1.13
Rpusd1Q8VCZ8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rpusd1Q8VCZ8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.07■■□□□ 1.12
Rpusd1Q8VCZ8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Rpusd1Q8VCZ8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rpusd1Q8VCZ8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rpusd1Q8VCZ8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rpusd1Q8VCZ8 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms