Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slf1Q8R3P9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slf1Q8R3P9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slf1Q8R3P9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Slf1Q8R3P9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slf1Q8R3P9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slf1Q8R3P9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slf1Q8R3P9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slf1Q8R3P9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slf1Q8R3P9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slf1Q8R3P9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slf1Q8R3P9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slf1Q8R3P9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Slf1Q8R3P9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Slf1Q8R3P9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.09■■□□□ 1.29
Slf1Q8R3P9 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.09■■□□□ 1.29
Slf1Q8R3P9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Slf1Q8R3P9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.09■■□□□ 1.29
Slf1Q8R3P9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Slf1Q8R3P9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slf1Q8R3P9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.08■■□□□ 1.29
Slf1Q8R3P9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slf1Q8R3P9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Slf1Q8R3P9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Slf1Q8R3P9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Slf1Q8R3P9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Slf1Q8R3P9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.07■■□□□ 1.28
Slf1Q8R3P9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slf1Q8R3P9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slf1Q8R3P9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slf1Q8R3P9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.06■■□□□ 1.28
Slf1Q8R3P9 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.06■■□□□ 1.28
Slf1Q8R3P9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Slf1Q8R3P9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slf1Q8R3P9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slf1Q8R3P9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
Slf1Q8R3P9 Gm9397-201ENSMUST00000200125 605 ntBASIC23.05■■□□□ 1.28
Slf1Q8R3P9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slf1Q8R3P9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Slf1Q8R3P9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slf1Q8R3P9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slf1Q8R3P9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slf1Q8R3P9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
Slf1Q8R3P9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Slf1Q8R3P9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slf1Q8R3P9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slf1Q8R3P9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Slf1Q8R3P9 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.03■■□□□ 1.28
Slf1Q8R3P9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slf1Q8R3P9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slf1Q8R3P9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.03■■□□□ 1.28
Slf1Q8R3P9 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.02■■□□□ 1.28
Slf1Q8R3P9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slf1Q8R3P9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.02■■□□□ 1.28
Slf1Q8R3P9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.02■■□□□ 1.28
Slf1Q8R3P9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slf1Q8R3P9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slf1Q8R3P9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Slf1Q8R3P9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slf1Q8R3P9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Slf1Q8R3P9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Slf1Q8R3P9 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.01■■□□□ 1.27
Slf1Q8R3P9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Slf1Q8R3P9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Slf1Q8R3P9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23■■□□□ 1.27
Slf1Q8R3P9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slf1Q8R3P9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Slf1Q8R3P9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Slf1Q8R3P9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Slf1Q8R3P9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.98■■□□□ 1.27
Slf1Q8R3P9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slf1Q8R3P9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.98■■□□□ 1.27
Slf1Q8R3P9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.98■■□□□ 1.27
Slf1Q8R3P9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Slf1Q8R3P9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slf1Q8R3P9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slf1Q8R3P9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Slf1Q8R3P9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Slf1Q8R3P9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Slf1Q8R3P9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Slf1Q8R3P9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Slf1Q8R3P9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.96■■□□□ 1.27
Slf1Q8R3P9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Slf1Q8R3P9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Slf1Q8R3P9 Gm24970-201ENSMUST00000175582 82 ntBASIC22.95■■□□□ 1.26
Slf1Q8R3P9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Slf1Q8R3P9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Slf1Q8R3P9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slf1Q8R3P9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slf1Q8R3P9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slf1Q8R3P9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.94■■□□□ 1.26
Slf1Q8R3P9 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.94■■□□□ 1.26
Slf1Q8R3P9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slf1Q8R3P9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slf1Q8R3P9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slf1Q8R3P9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Slf1Q8R3P9 Gm45855-201ENSMUST00000212546 880 ntBASIC22.93■■□□□ 1.26
Slf1Q8R3P9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Slf1Q8R3P9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Slf1Q8R3P9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms