Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.14■■■□□ 2.26
Trim52Q8CDV4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC29.14■■■□□ 2.26
Trim52Q8CDV4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC29.14■■■□□ 2.26
Trim52Q8CDV4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Trim52Q8CDV4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Trim52Q8CDV4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Trim52Q8CDV4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Trim52Q8CDV4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC29.12■■■□□ 2.25
Trim52Q8CDV4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC29.12■■■□□ 2.25
Trim52Q8CDV4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Trim52Q8CDV4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC29.12■■■□□ 2.25
Trim52Q8CDV4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Trim52Q8CDV4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Trim52Q8CDV4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Trim52Q8CDV4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Trim52Q8CDV4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Trim52Q8CDV4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Trim52Q8CDV4 Gm14523-201ENSMUST00000117260 558 ntBASIC29.1■■■□□ 2.25
Trim52Q8CDV4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Trim52Q8CDV4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
Trim52Q8CDV4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Trim52Q8CDV4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Trim52Q8CDV4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Trim52Q8CDV4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Trim52Q8CDV4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC29.09■■■□□ 2.25
Trim52Q8CDV4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Trim52Q8CDV4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC29.07■■■□□ 2.24
Trim52Q8CDV4 Terc-201ENSMUST00000082862 423 ntBASIC29.07■■■□□ 2.24
Trim52Q8CDV4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Trim52Q8CDV4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Trim52Q8CDV4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Trim52Q8CDV4 Gm7332-201ENSMUST00000118351 454 ntBASIC29.05■■■□□ 2.24
Trim52Q8CDV4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Trim52Q8CDV4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Trim52Q8CDV4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC29.04■■■□□ 2.24
Trim52Q8CDV4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Trim52Q8CDV4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC29.03■■■□□ 2.24
Trim52Q8CDV4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Trim52Q8CDV4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Trim52Q8CDV4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC29.03■■■□□ 2.24
Trim52Q8CDV4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
Trim52Q8CDV4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Trim52Q8CDV4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Trim52Q8CDV4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC29■■■□□ 2.23
Trim52Q8CDV4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Trim52Q8CDV4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Trim52Q8CDV4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Trim52Q8CDV4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Trim52Q8CDV4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
Trim52Q8CDV4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC28.99■■■□□ 2.23
Trim52Q8CDV4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Trim52Q8CDV4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.98■■■□□ 2.23
Trim52Q8CDV4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Trim52Q8CDV4 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.97■■■□□ 2.23
Trim52Q8CDV4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Trim52Q8CDV4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
Trim52Q8CDV4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Trim52Q8CDV4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Trim52Q8CDV4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Trim52Q8CDV4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC28.96■■■□□ 2.23
Trim52Q8CDV4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Trim52Q8CDV4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.96■■■□□ 2.23
Trim52Q8CDV4 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.96■■■□□ 2.23
Trim52Q8CDV4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Trim52Q8CDV4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC28.95■■■□□ 2.23
Trim52Q8CDV4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
Trim52Q8CDV4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Trim52Q8CDV4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Trim52Q8CDV4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Trim52Q8CDV4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.92■■■□□ 2.22
Trim52Q8CDV4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Trim52Q8CDV4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Trim52Q8CDV4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
Trim52Q8CDV4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Trim52Q8CDV4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Trim52Q8CDV4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Trim52Q8CDV4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Trim52Q8CDV4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Trim52Q8CDV4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Trim52Q8CDV4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC28.89■■■□□ 2.22
Trim52Q8CDV4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.89■■■□□ 2.22
Trim52Q8CDV4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Trim52Q8CDV4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Trim52Q8CDV4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Trim52Q8CDV4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.88■■■□□ 2.21
Trim52Q8CDV4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.87■■■□□ 2.21
Trim52Q8CDV4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Trim52Q8CDV4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Trim52Q8CDV4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.86■■■□□ 2.21
Trim52Q8CDV4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Trim52Q8CDV4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC28.86■■■□□ 2.21
Trim52Q8CDV4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Trim52Q8CDV4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.86■■■□□ 2.21
Trim52Q8CDV4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim52Q8CDV4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim52Q8CDV4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Trim52Q8CDV4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Trim52Q8CDV4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Trim52Q8CDV4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC28.83■■■□□ 2.21
Trim52Q8CDV4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms