Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11541Q8C4D8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm11541Q8C4D8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11541Q8C4D8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11541Q8C4D8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.52■□□□□ 0.88
Gm11541Q8C4D8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11541Q8C4D8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11541Q8C4D8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm11541Q8C4D8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm11541Q8C4D8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.51■□□□□ 0.87
Gm11541Q8C4D8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm11541Q8C4D8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gm11541Q8C4D8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm11541Q8C4D8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11541Q8C4D8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11541Q8C4D8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11541Q8C4D8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
Gm11541Q8C4D8 Gm7432-201ENSMUST00000210343 879 ntBASIC20.5■□□□□ 0.87
Gm11541Q8C4D8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11541Q8C4D8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm11541Q8C4D8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Gm11541Q8C4D8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Gm11541Q8C4D8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.49■□□□□ 0.87
Gm11541Q8C4D8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm11541Q8C4D8 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.49■□□□□ 0.87
Gm11541Q8C4D8 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.49■□□□□ 0.87
Gm11541Q8C4D8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm11541Q8C4D8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11541Q8C4D8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11541Q8C4D8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11541Q8C4D8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm11541Q8C4D8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm11541Q8C4D8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm11541Q8C4D8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11541Q8C4D8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11541Q8C4D8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.46■□□□□ 0.87
Gm11541Q8C4D8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.46■□□□□ 0.87
Gm11541Q8C4D8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Gm11541Q8C4D8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11541Q8C4D8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm11541Q8C4D8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm11541Q8C4D8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm11541Q8C4D8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11541Q8C4D8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Gm11541Q8C4D8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11541Q8C4D8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11541Q8C4D8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11541Q8C4D8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11541Q8C4D8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm11541Q8C4D8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm11541Q8C4D8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Gm11541Q8C4D8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm11541Q8C4D8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.43■□□□□ 0.86
Gm11541Q8C4D8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm11541Q8C4D8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.43■□□□□ 0.86
Gm11541Q8C4D8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11541Q8C4D8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11541Q8C4D8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11541Q8C4D8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Gm11541Q8C4D8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm11541Q8C4D8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.4■□□□□ 0.86
Gm11541Q8C4D8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11541Q8C4D8 Gm11599-201ENSMUST00000118720 878 ntBASIC20.4■□□□□ 0.86
Gm11541Q8C4D8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11541Q8C4D8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11541Q8C4D8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11541Q8C4D8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm11541Q8C4D8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11541Q8C4D8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.39■□□□□ 0.85
Gm11541Q8C4D8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11541Q8C4D8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm11541Q8C4D8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11541Q8C4D8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11541Q8C4D8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm11541Q8C4D8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm11541Q8C4D8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm11541Q8C4D8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Gm11541Q8C4D8 Gm37136-201ENSMUST00000194368 194 ntBASIC20.37■□□□□ 0.85
Gm11541Q8C4D8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm11541Q8C4D8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm11541Q8C4D8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11541Q8C4D8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.36■□□□□ 0.85
Gm11541Q8C4D8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Gm11541Q8C4D8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11541Q8C4D8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm11541Q8C4D8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Gm11541Q8C4D8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Gm11541Q8C4D8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11541Q8C4D8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.35■□□□□ 0.85
Gm11541Q8C4D8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Gm11541Q8C4D8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Gm11541Q8C4D8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm11541Q8C4D8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm11541Q8C4D8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm11541Q8C4D8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11541Q8C4D8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11541Q8C4D8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm11541Q8C4D8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm11541Q8C4D8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm11541Q8C4D8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms