Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gm9812-201ENSMUST00000061934 968 ntBASIC24.32■■□□□ 1.48
Brat1Q8C3R1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Brat1Q8C3R1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Brat1Q8C3R1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Brat1Q8C3R1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Brat1Q8C3R1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.29■■□□□ 1.48
Brat1Q8C3R1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Brat1Q8C3R1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Brat1Q8C3R1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.28■■□□□ 1.48
Brat1Q8C3R1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.27■■□□□ 1.48
Brat1Q8C3R1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Brat1Q8C3R1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.27■■□□□ 1.48
Brat1Q8C3R1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Brat1Q8C3R1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.27■■□□□ 1.48
Brat1Q8C3R1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Brat1Q8C3R1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Brat1Q8C3R1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Brat1Q8C3R1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Brat1Q8C3R1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Brat1Q8C3R1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Brat1Q8C3R1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.26■■□□□ 1.47
Brat1Q8C3R1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Brat1Q8C3R1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Brat1Q8C3R1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Brat1Q8C3R1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Brat1Q8C3R1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Brat1Q8C3R1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Brat1Q8C3R1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Brat1Q8C3R1 Gm11175-201ENSMUST00000116172 543 ntBASIC24.24■■□□□ 1.47
Brat1Q8C3R1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.24■■□□□ 1.47
Brat1Q8C3R1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.24■■□□□ 1.47
Brat1Q8C3R1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Brat1Q8C3R1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Brat1Q8C3R1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Brat1Q8C3R1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Brat1Q8C3R1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Brat1Q8C3R1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Brat1Q8C3R1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
Brat1Q8C3R1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Brat1Q8C3R1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Brat1Q8C3R1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Brat1Q8C3R1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.22■■□□□ 1.47
Brat1Q8C3R1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Brat1Q8C3R1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Brat1Q8C3R1 Scarna2-201ENSMUST00000157560 414 ntBASIC24.21■■□□□ 1.47
Brat1Q8C3R1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Brat1Q8C3R1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Brat1Q8C3R1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Brat1Q8C3R1 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.2■■□□□ 1.46
Brat1Q8C3R1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Brat1Q8C3R1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Brat1Q8C3R1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Brat1Q8C3R1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Brat1Q8C3R1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Brat1Q8C3R1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Brat1Q8C3R1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Brat1Q8C3R1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Brat1Q8C3R1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Brat1Q8C3R1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Brat1Q8C3R1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Brat1Q8C3R1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Brat1Q8C3R1 Gm9806-201ENSMUST00000051080 552 ntBASIC24.18■■□□□ 1.46
Brat1Q8C3R1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Brat1Q8C3R1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
Brat1Q8C3R1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Brat1Q8C3R1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Brat1Q8C3R1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Brat1Q8C3R1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.16■■□□□ 1.46
Brat1Q8C3R1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Brat1Q8C3R1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Brat1Q8C3R1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Brat1Q8C3R1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Brat1Q8C3R1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Brat1Q8C3R1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Brat1Q8C3R1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Brat1Q8C3R1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Brat1Q8C3R1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Brat1Q8C3R1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Brat1Q8C3R1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Brat1Q8C3R1 Gm16437-201ENSMUST00000025669 507 ntBASIC24.13■■□□□ 1.45
Brat1Q8C3R1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Brat1Q8C3R1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Brat1Q8C3R1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Brat1Q8C3R1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Brat1Q8C3R1 Gm11687-201ENSMUST00000118911 886 ntBASIC24.12■■□□□ 1.45
Brat1Q8C3R1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Brat1Q8C3R1 Terc-201ENSMUST00000082862 423 ntBASIC24.12■■□□□ 1.45
Brat1Q8C3R1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Brat1Q8C3R1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.11■■□□□ 1.45
Brat1Q8C3R1 Mir6538-201ENSMUST00000183713 110 ntBASIC24.11■■□□□ 1.45
Brat1Q8C3R1 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.11■■□□□ 1.45
Brat1Q8C3R1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Brat1Q8C3R1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Brat1Q8C3R1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Brat1Q8C3R1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Brat1Q8C3R1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Brat1Q8C3R1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Brat1Q8C3R1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Brat1Q8C3R1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Brat1Q8C3R1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms