Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm11Q8BUV6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.5■□□□□ 0.71
Lsm11Q8BUV6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lsm11Q8BUV6 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.49■□□□□ 0.71
Lsm11Q8BUV6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.49■□□□□ 0.71
Lsm11Q8BUV6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lsm11Q8BUV6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm11Q8BUV6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm11Q8BUV6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Lsm11Q8BUV6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm11Q8BUV6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lsm11Q8BUV6 Gm9397-201ENSMUST00000200125 605 ntBASIC19.48■□□□□ 0.71
Lsm11Q8BUV6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm11Q8BUV6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm11Q8BUV6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lsm11Q8BUV6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Lsm11Q8BUV6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm11Q8BUV6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm11Q8BUV6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm11Q8BUV6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm11Q8BUV6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm11Q8BUV6 Gm24970-201ENSMUST00000175582 82 ntBASIC19.47■□□□□ 0.71
Lsm11Q8BUV6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lsm11Q8BUV6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.46■□□□□ 0.71
Lsm11Q8BUV6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm11Q8BUV6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm11Q8BUV6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Lsm11Q8BUV6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm11Q8BUV6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm11Q8BUV6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lsm11Q8BUV6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Lsm11Q8BUV6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm11Q8BUV6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lsm11Q8BUV6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm11Q8BUV6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm11Q8BUV6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm11Q8BUV6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm11Q8BUV6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lsm11Q8BUV6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lsm11Q8BUV6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm11Q8BUV6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lsm11Q8BUV6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lsm11Q8BUV6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm11Q8BUV6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lsm11Q8BUV6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm11Q8BUV6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Lsm11Q8BUV6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm11Q8BUV6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm11Q8BUV6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.42■□□□□ 0.7
Lsm11Q8BUV6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm11Q8BUV6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm11Q8BUV6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm11Q8BUV6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lsm11Q8BUV6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lsm11Q8BUV6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Lsm11Q8BUV6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm11Q8BUV6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.41■□□□□ 0.7
Lsm11Q8BUV6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm11Q8BUV6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm11Q8BUV6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lsm11Q8BUV6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm11Q8BUV6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm11Q8BUV6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm11Q8BUV6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lsm11Q8BUV6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Lsm11Q8BUV6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm11Q8BUV6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm11Q8BUV6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm11Q8BUV6 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.39■□□□□ 0.69
Lsm11Q8BUV6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm11Q8BUV6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm11Q8BUV6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm11Q8BUV6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm11Q8BUV6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lsm11Q8BUV6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Lsm11Q8BUV6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lsm11Q8BUV6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm11Q8BUV6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm11Q8BUV6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm11Q8BUV6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm11Q8BUV6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm11Q8BUV6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm11Q8BUV6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm11Q8BUV6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.36■□□□□ 0.69
Lsm11Q8BUV6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.36■□□□□ 0.69
Lsm11Q8BUV6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Lsm11Q8BUV6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Lsm11Q8BUV6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm11Q8BUV6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms