Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco3Q8BQM7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco3Q8BQM7 Gm16148-201ENSMUST00000119653 893 ntBASIC18.82■□□□□ 0.6
Smco3Q8BQM7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smco3Q8BQM7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smco3Q8BQM7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smco3Q8BQM7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smco3Q8BQM7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smco3Q8BQM7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Smco3Q8BQM7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco3Q8BQM7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco3Q8BQM7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smco3Q8BQM7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Smco3Q8BQM7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Smco3Q8BQM7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Smco3Q8BQM7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Smco3Q8BQM7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smco3Q8BQM7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smco3Q8BQM7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smco3Q8BQM7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.78■□□□□ 0.6
Smco3Q8BQM7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smco3Q8BQM7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smco3Q8BQM7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smco3Q8BQM7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smco3Q8BQM7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smco3Q8BQM7 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.77■□□□□ 0.6
Smco3Q8BQM7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smco3Q8BQM7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Smco3Q8BQM7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smco3Q8BQM7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smco3Q8BQM7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smco3Q8BQM7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smco3Q8BQM7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smco3Q8BQM7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smco3Q8BQM7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smco3Q8BQM7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smco3Q8BQM7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smco3Q8BQM7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smco3Q8BQM7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smco3Q8BQM7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smco3Q8BQM7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smco3Q8BQM7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smco3Q8BQM7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smco3Q8BQM7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smco3Q8BQM7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smco3Q8BQM7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Smco3Q8BQM7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smco3Q8BQM7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Smco3Q8BQM7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smco3Q8BQM7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smco3Q8BQM7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smco3Q8BQM7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smco3Q8BQM7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smco3Q8BQM7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.72■□□□□ 0.59
Smco3Q8BQM7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smco3Q8BQM7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.72■□□□□ 0.59
Smco3Q8BQM7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smco3Q8BQM7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smco3Q8BQM7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Smco3Q8BQM7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smco3Q8BQM7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smco3Q8BQM7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Smco3Q8BQM7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smco3Q8BQM7 Gm24804-201ENSMUST00000174982 85 ntBASIC18.71■□□□□ 0.59
Smco3Q8BQM7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.71■□□□□ 0.59
Smco3Q8BQM7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smco3Q8BQM7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smco3Q8BQM7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smco3Q8BQM7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Smco3Q8BQM7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smco3Q8BQM7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smco3Q8BQM7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smco3Q8BQM7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smco3Q8BQM7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smco3Q8BQM7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smco3Q8BQM7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smco3Q8BQM7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smco3Q8BQM7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco3Q8BQM7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.68■□□□□ 0.58
Smco3Q8BQM7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smco3Q8BQM7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco3Q8BQM7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco3Q8BQM7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smco3Q8BQM7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smco3Q8BQM7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco3Q8BQM7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smco3Q8BQM7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Smco3Q8BQM7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco3Q8BQM7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco3Q8BQM7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smco3Q8BQM7 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.65■□□□□ 0.58
Smco3Q8BQM7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco3Q8BQM7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smco3Q8BQM7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smco3Q8BQM7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smco3Q8BQM7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smco3Q8BQM7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Smco3Q8BQM7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smco3Q8BQM7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smco3Q8BQM7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 722.5 ms