Protein–RNA interactions for Protein: Q8BGR5

Fam53b, Protein FAM53B, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53bQ8BGR5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam53bQ8BGR5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fam53bQ8BGR5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Fam53bQ8BGR5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.3■□□□□ 0.84
Fam53bQ8BGR5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam53bQ8BGR5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam53bQ8BGR5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Fam53bQ8BGR5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Fam53bQ8BGR5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam53bQ8BGR5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam53bQ8BGR5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.28■□□□□ 0.84
Fam53bQ8BGR5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam53bQ8BGR5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam53bQ8BGR5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Fam53bQ8BGR5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam53bQ8BGR5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam53bQ8BGR5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Fam53bQ8BGR5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Fam53bQ8BGR5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam53bQ8BGR5 Gm7432-201ENSMUST00000210343 879 ntBASIC20.26■□□□□ 0.83
Fam53bQ8BGR5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam53bQ8BGR5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam53bQ8BGR5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam53bQ8BGR5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Fam53bQ8BGR5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Fam53bQ8BGR5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Fam53bQ8BGR5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam53bQ8BGR5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Fam53bQ8BGR5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Fam53bQ8BGR5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam53bQ8BGR5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam53bQ8BGR5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam53bQ8BGR5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam53bQ8BGR5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Fam53bQ8BGR5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.23■□□□□ 0.83
Fam53bQ8BGR5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Fam53bQ8BGR5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam53bQ8BGR5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam53bQ8BGR5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fam53bQ8BGR5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam53bQ8BGR5 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.22■□□□□ 0.83
Fam53bQ8BGR5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Fam53bQ8BGR5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam53bQ8BGR5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.22■□□□□ 0.83
Fam53bQ8BGR5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam53bQ8BGR5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam53bQ8BGR5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Fam53bQ8BGR5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Fam53bQ8BGR5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam53bQ8BGR5 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fam53bQ8BGR5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.2■□□□□ 0.82
Fam53bQ8BGR5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fam53bQ8BGR5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Fam53bQ8BGR5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.2■□□□□ 0.82
Fam53bQ8BGR5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.2■□□□□ 0.82
Fam53bQ8BGR5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Fam53bQ8BGR5 Gm11599-201ENSMUST00000118720 878 ntBASIC20.19■□□□□ 0.82
Fam53bQ8BGR5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fam53bQ8BGR5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam53bQ8BGR5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fam53bQ8BGR5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam53bQ8BGR5 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.18■□□□□ 0.82
Fam53bQ8BGR5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam53bQ8BGR5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Fam53bQ8BGR5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam53bQ8BGR5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam53bQ8BGR5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam53bQ8BGR5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam53bQ8BGR5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam53bQ8BGR5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fam53bQ8BGR5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Fam53bQ8BGR5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam53bQ8BGR5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Fam53bQ8BGR5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Fam53bQ8BGR5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Fam53bQ8BGR5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Fam53bQ8BGR5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam53bQ8BGR5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam53bQ8BGR5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam53bQ8BGR5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam53bQ8BGR5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam53bQ8BGR5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.12■□□□□ 0.81
Fam53bQ8BGR5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam53bQ8BGR5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam53bQ8BGR5 Gm4799-201ENSMUST00000095396 657 ntBASIC20.12■□□□□ 0.81
Fam53bQ8BGR5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Fam53bQ8BGR5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fam53bQ8BGR5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fam53bQ8BGR5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Fam53bQ8BGR5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fam53bQ8BGR5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fam53bQ8BGR5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fam53bQ8BGR5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fam53bQ8BGR5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fam53bQ8BGR5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Fam53bQ8BGR5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Fam53bQ8BGR5 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.08■□□□□ 0.81
Fam53bQ8BGR5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fam53bQ8BGR5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fam53bQ8BGR5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms