Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.39■□□□□ 0.69
Upk3bQ80YF6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk3bQ80YF6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Upk3bQ80YF6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Upk3bQ80YF6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.38■□□□□ 0.69
Upk3bQ80YF6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bQ80YF6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bQ80YF6 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.37■□□□□ 0.69
Upk3bQ80YF6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk3bQ80YF6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Upk3bQ80YF6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk3bQ80YF6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk3bQ80YF6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Upk3bQ80YF6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Upk3bQ80YF6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk3bQ80YF6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk3bQ80YF6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk3bQ80YF6 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.34■□□□□ 0.69
Upk3bQ80YF6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk3bQ80YF6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Upk3bQ80YF6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Upk3bQ80YF6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Upk3bQ80YF6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Upk3bQ80YF6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upk3bQ80YF6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Upk3bQ80YF6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Upk3bQ80YF6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Upk3bQ80YF6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Upk3bQ80YF6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk3bQ80YF6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk3bQ80YF6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Upk3bQ80YF6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Upk3bQ80YF6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk3bQ80YF6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.3■□□□□ 0.68
Upk3bQ80YF6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Upk3bQ80YF6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Upk3bQ80YF6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Upk3bQ80YF6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk3bQ80YF6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upk3bQ80YF6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk3bQ80YF6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upk3bQ80YF6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upk3bQ80YF6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Upk3bQ80YF6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Upk3bQ80YF6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Upk3bQ80YF6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upk3bQ80YF6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk3bQ80YF6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upk3bQ80YF6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.25■□□□□ 0.67
Upk3bQ80YF6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk3bQ80YF6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Upk3bQ80YF6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upk3bQ80YF6 Gm45855-201ENSMUST00000212546 880 ntBASIC19.25■□□□□ 0.67
Upk3bQ80YF6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upk3bQ80YF6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk3bQ80YF6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.24■□□□□ 0.67
Upk3bQ80YF6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk3bQ80YF6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk3bQ80YF6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.24■□□□□ 0.67
Upk3bQ80YF6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Upk3bQ80YF6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upk3bQ80YF6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Upk3bQ80YF6 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.23■□□□□ 0.67
Upk3bQ80YF6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Upk3bQ80YF6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Upk3bQ80YF6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Upk3bQ80YF6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.23■□□□□ 0.67
Upk3bQ80YF6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk3bQ80YF6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.22■□□□□ 0.67
Upk3bQ80YF6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk3bQ80YF6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk3bQ80YF6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk3bQ80YF6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Upk3bQ80YF6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Upk3bQ80YF6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk3bQ80YF6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk3bQ80YF6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Upk3bQ80YF6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Upk3bQ80YF6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk3bQ80YF6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.2■□□□□ 0.66
Upk3bQ80YF6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk3bQ80YF6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Upk3bQ80YF6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Upk3bQ80YF6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upk3bQ80YF6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Upk3bQ80YF6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upk3bQ80YF6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Upk3bQ80YF6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk3bQ80YF6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Upk3bQ80YF6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Upk3bQ80YF6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Upk3bQ80YF6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Upk3bQ80YF6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upk3bQ80YF6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Upk3bQ80YF6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.16■□□□□ 0.66
Upk3bQ80YF6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Upk3bQ80YF6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Upk3bQ80YF6 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.16■□□□□ 0.66
Upk3bQ80YF6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Upk3bQ80YF6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms