Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Prpf40bQ80W14 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Prpf40bQ80W14 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Prpf40bQ80W14 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.55■■□□□ 1.84
Prpf40bQ80W14 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Prpf40bQ80W14 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Prpf40bQ80W14 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Prpf40bQ80W14 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.54■■□□□ 1.84
Prpf40bQ80W14 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Prpf40bQ80W14 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Prpf40bQ80W14 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Prpf40bQ80W14 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Prpf40bQ80W14 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Prpf40bQ80W14 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Prpf40bQ80W14 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Prpf40bQ80W14 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Prpf40bQ80W14 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Prpf40bQ80W14 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Prpf40bQ80W14 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Prpf40bQ80W14 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Prpf40bQ80W14 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.47■■□□□ 1.83
Prpf40bQ80W14 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Prpf40bQ80W14 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Prpf40bQ80W14 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Prpf40bQ80W14 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.46■■□□□ 1.83
Prpf40bQ80W14 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Prpf40bQ80W14 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Prpf40bQ80W14 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Prpf40bQ80W14 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Prpf40bQ80W14 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Prpf40bQ80W14 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.44■■□□□ 1.82
Prpf40bQ80W14 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Prpf40bQ80W14 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Prpf40bQ80W14 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Prpf40bQ80W14 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Prpf40bQ80W14 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Prpf40bQ80W14 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Prpf40bQ80W14 Gm5921-201ENSMUST00000075898 882 ntBASIC26.4■■□□□ 1.82
Prpf40bQ80W14 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Prpf40bQ80W14 Gm15546-201ENSMUST00000122095 826 ntBASIC26.39■■□□□ 1.82
Prpf40bQ80W14 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Prpf40bQ80W14 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.39■■□□□ 1.81
Prpf40bQ80W14 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.37■■□□□ 1.81
Prpf40bQ80W14 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Prpf40bQ80W14 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.37■■□□□ 1.81
Prpf40bQ80W14 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Prpf40bQ80W14 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.36■■□□□ 1.81
Prpf40bQ80W14 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Prpf40bQ80W14 Gm10420-201ENSMUST00000121713 882 ntBASIC26.35■■□□□ 1.81
Prpf40bQ80W14 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.35■■□□□ 1.81
Prpf40bQ80W14 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Prpf40bQ80W14 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
Prpf40bQ80W14 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Prpf40bQ80W14 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Prpf40bQ80W14 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Prpf40bQ80W14 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.32■■□□□ 1.8
Prpf40bQ80W14 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.32■■□□□ 1.8
Prpf40bQ80W14 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Gm37136-201ENSMUST00000194368 194 ntBASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Prpf40bQ80W14 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Prpf40bQ80W14 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Prpf40bQ80W14 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.28■■□□□ 1.8
Prpf40bQ80W14 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.28■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms