Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Prpf40bQ80W14 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Prpf40bQ80W14 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Prpf40bQ80W14 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.55■■□□□ 1.84
Prpf40bQ80W14 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Prpf40bQ80W14 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Prpf40bQ80W14 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Prpf40bQ80W14 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.54■■□□□ 1.84
Prpf40bQ80W14 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Prpf40bQ80W14 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Prpf40bQ80W14 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Prpf40bQ80W14 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Prpf40bQ80W14 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Prpf40bQ80W14 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Prpf40bQ80W14 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Prpf40bQ80W14 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Prpf40bQ80W14 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Prpf40bQ80W14 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Prpf40bQ80W14 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Prpf40bQ80W14 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Prpf40bQ80W14 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Prpf40bQ80W14 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.47■■□□□ 1.83
Prpf40bQ80W14 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Prpf40bQ80W14 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Prpf40bQ80W14 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Prpf40bQ80W14 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.46■■□□□ 1.83
Prpf40bQ80W14 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Prpf40bQ80W14 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Prpf40bQ80W14 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Prpf40bQ80W14 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Prpf40bQ80W14 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Prpf40bQ80W14 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.44■■□□□ 1.82
Prpf40bQ80W14 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Prpf40bQ80W14 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Prpf40bQ80W14 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Prpf40bQ80W14 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Prpf40bQ80W14 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Prpf40bQ80W14 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Prpf40bQ80W14 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Prpf40bQ80W14 Gm5921-201ENSMUST00000075898 882 ntBASIC26.4■■□□□ 1.82
Prpf40bQ80W14 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Prpf40bQ80W14 Gm15546-201ENSMUST00000122095 826 ntBASIC26.39■■□□□ 1.82
Prpf40bQ80W14 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Prpf40bQ80W14 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.39■■□□□ 1.81
Prpf40bQ80W14 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.37■■□□□ 1.81
Prpf40bQ80W14 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Prpf40bQ80W14 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.37■■□□□ 1.81
Prpf40bQ80W14 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Prpf40bQ80W14 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.36■■□□□ 1.81
Prpf40bQ80W14 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Prpf40bQ80W14 Gm10420-201ENSMUST00000121713 882 ntBASIC26.35■■□□□ 1.81
Prpf40bQ80W14 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.35■■□□□ 1.81
Prpf40bQ80W14 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Prpf40bQ80W14 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Prpf40bQ80W14 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
Prpf40bQ80W14 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Prpf40bQ80W14 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Prpf40bQ80W14 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Prpf40bQ80W14 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.32■■□□□ 1.8
Prpf40bQ80W14 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.32■■□□□ 1.8
Prpf40bQ80W14 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Gm37136-201ENSMUST00000194368 194 ntBASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Prpf40bQ80W14 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Prpf40bQ80W14 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.29■■□□□ 1.8
Prpf40bQ80W14 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Prpf40bQ80W14 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Prpf40bQ80W14 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Prpf40bQ80W14 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.28■■□□□ 1.8
Prpf40bQ80W14 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.28■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms