Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Rfx4Q7TNK1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Rfx4Q7TNK1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rfx4Q7TNK1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfx4Q7TNK1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rfx4Q7TNK1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rfx4Q7TNK1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.98■■□□□ 1.11
Rfx4Q7TNK1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfx4Q7TNK1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.97■■□□□ 1.11
Rfx4Q7TNK1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfx4Q7TNK1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.97■■□□□ 1.11
Rfx4Q7TNK1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfx4Q7TNK1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfx4Q7TNK1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rfx4Q7TNK1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Rfx4Q7TNK1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Rfx4Q7TNK1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfx4Q7TNK1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rfx4Q7TNK1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rfx4Q7TNK1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rfx4Q7TNK1 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.95■■□□□ 1.1
Rfx4Q7TNK1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rfx4Q7TNK1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rfx4Q7TNK1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rfx4Q7TNK1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rfx4Q7TNK1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Rfx4Q7TNK1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfx4Q7TNK1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfx4Q7TNK1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfx4Q7TNK1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rfx4Q7TNK1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Rfx4Q7TNK1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rfx4Q7TNK1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Rfx4Q7TNK1 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.94■■□□□ 1.1
Rfx4Q7TNK1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Rfx4Q7TNK1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.94■■□□□ 1.1
Rfx4Q7TNK1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx4Q7TNK1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx4Q7TNK1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.93■■□□□ 1.1
Rfx4Q7TNK1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx4Q7TNK1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rfx4Q7TNK1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Rfx4Q7TNK1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rfx4Q7TNK1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Rfx4Q7TNK1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Rfx4Q7TNK1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Rfx4Q7TNK1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rfx4Q7TNK1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rfx4Q7TNK1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfx4Q7TNK1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfx4Q7TNK1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfx4Q7TNK1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfx4Q7TNK1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rfx4Q7TNK1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfx4Q7TNK1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfx4Q7TNK1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rfx4Q7TNK1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Rfx4Q7TNK1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rfx4Q7TNK1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rfx4Q7TNK1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.89■■□□□ 1.1
Rfx4Q7TNK1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Rfx4Q7TNK1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Rfx4Q7TNK1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rfx4Q7TNK1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rfx4Q7TNK1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rfx4Q7TNK1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.87■■□□□ 1.09
Rfx4Q7TNK1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rfx4Q7TNK1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Rfx4Q7TNK1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rfx4Q7TNK1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rfx4Q7TNK1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rfx4Q7TNK1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Rfx4Q7TNK1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Rfx4Q7TNK1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rfx4Q7TNK1 Gm30023-201ENSMUST00000197970 889 ntBASIC21.85■■□□□ 1.09
Rfx4Q7TNK1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Rfx4Q7TNK1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfx4Q7TNK1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfx4Q7TNK1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rfx4Q7TNK1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.84■■□□□ 1.09
Rfx4Q7TNK1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfx4Q7TNK1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rfx4Q7TNK1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.83■■□□□ 1.09
Rfx4Q7TNK1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rfx4Q7TNK1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rfx4Q7TNK1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Rfx4Q7TNK1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rfx4Q7TNK1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rfx4Q7TNK1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Rfx4Q7TNK1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.83■■□□□ 1.08
Rfx4Q7TNK1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rfx4Q7TNK1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.83■■□□□ 1.08
Rfx4Q7TNK1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rfx4Q7TNK1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rfx4Q7TNK1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rfx4Q7TNK1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Rfx4Q7TNK1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rfx4Q7TNK1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rfx4Q7TNK1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.8■■□□□ 1.08
Rfx4Q7TNK1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms