Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Kdm1aQ6ZQ88 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Kdm1aQ6ZQ88 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Kdm1aQ6ZQ88 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Kdm1aQ6ZQ88 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC25.4■■□□□ 1.66
Kdm1aQ6ZQ88 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm1aQ6ZQ88 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Kdm1aQ6ZQ88 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Kdm1aQ6ZQ88 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Kdm1aQ6ZQ88 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Kdm1aQ6ZQ88 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Kdm1aQ6ZQ88 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Kdm1aQ6ZQ88 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Kdm1aQ6ZQ88 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.34■■□□□ 1.65
Kdm1aQ6ZQ88 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Kdm1aQ6ZQ88 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Kdm1aQ6ZQ88 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Kdm1aQ6ZQ88 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Kdm1aQ6ZQ88 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm1aQ6ZQ88 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.32■■□□□ 1.64
Kdm1aQ6ZQ88 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm1aQ6ZQ88 Gm8503-201ENSMUST00000118131 455 ntBASIC25.32■■□□□ 1.64
Kdm1aQ6ZQ88 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.32■■□□□ 1.64
Kdm1aQ6ZQ88 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm1aQ6ZQ88 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Kdm1aQ6ZQ88 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Kdm1aQ6ZQ88 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Kdm1aQ6ZQ88 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Kdm1aQ6ZQ88 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Kdm1aQ6ZQ88 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Kdm1aQ6ZQ88 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Kdm1aQ6ZQ88 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Kdm1aQ6ZQ88 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Kdm1aQ6ZQ88 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Kdm1aQ6ZQ88 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Kdm1aQ6ZQ88 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Kdm1aQ6ZQ88 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Kdm1aQ6ZQ88 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Kdm1aQ6ZQ88 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Kdm1aQ6ZQ88 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Kdm1aQ6ZQ88 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Kdm1aQ6ZQ88 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Kdm1aQ6ZQ88 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Kdm1aQ6ZQ88 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Kdm1aQ6ZQ88 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Kdm1aQ6ZQ88 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Kdm1aQ6ZQ88 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Kdm1aQ6ZQ88 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Kdm1aQ6ZQ88 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Kdm1aQ6ZQ88 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
Kdm1aQ6ZQ88 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Kdm1aQ6ZQ88 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Kdm1aQ6ZQ88 Il17rd-202ENSMUST00000223942 2186 ntBASIC25.25■■□□□ 1.63
Kdm1aQ6ZQ88 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Kdm1aQ6ZQ88 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Kdm1aQ6ZQ88 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Kdm1aQ6ZQ88 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.24■■□□□ 1.63
Kdm1aQ6ZQ88 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Kdm1aQ6ZQ88 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.23■■□□□ 1.63
Kdm1aQ6ZQ88 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Kdm1aQ6ZQ88 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Kdm1aQ6ZQ88 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Kdm1aQ6ZQ88 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Kdm1aQ6ZQ88 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Kdm1aQ6ZQ88 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Kdm1aQ6ZQ88 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.22■■□□□ 1.63
Kdm1aQ6ZQ88 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.21■■□□□ 1.63
Kdm1aQ6ZQ88 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Kdm1aQ6ZQ88 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Kdm1aQ6ZQ88 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Kdm1aQ6ZQ88 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.2■■□□□ 1.62
Kdm1aQ6ZQ88 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.19■■□□□ 1.62
Kdm1aQ6ZQ88 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Kdm1aQ6ZQ88 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Kdm1aQ6ZQ88 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Kdm1aQ6ZQ88 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Kdm1aQ6ZQ88 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.18■■□□□ 1.62
Kdm1aQ6ZQ88 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Kdm1aQ6ZQ88 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Kdm1aQ6ZQ88 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.17■■□□□ 1.62
Kdm1aQ6ZQ88 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Kdm1aQ6ZQ88 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Kdm1aQ6ZQ88 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.17■■□□□ 1.62
Kdm1aQ6ZQ88 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.17■■□□□ 1.62
Kdm1aQ6ZQ88 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.16■■□□□ 1.62
Kdm1aQ6ZQ88 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Kdm1aQ6ZQ88 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Kdm1aQ6ZQ88 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Kdm1aQ6ZQ88 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Kdm1aQ6ZQ88 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Kdm1aQ6ZQ88 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.15■■□□□ 1.62
Kdm1aQ6ZQ88 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Kdm1aQ6ZQ88 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Kdm1aQ6ZQ88 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Kdm1aQ6ZQ88 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Kdm1aQ6ZQ88 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Kdm1aQ6ZQ88 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Kdm1aQ6ZQ88 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Kdm1aQ6ZQ88 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.14■■□□□ 1.61
Kdm1aQ6ZQ88 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 268.8 ms