Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc36Q6PDM4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc36Q6PDM4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc36Q6PDM4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc36Q6PDM4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc36Q6PDM4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.39■□□□□ 0.69
Ccdc36Q6PDM4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.39■□□□□ 0.69
Ccdc36Q6PDM4 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.39■□□□□ 0.69
Ccdc36Q6PDM4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc36Q6PDM4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc36Q6PDM4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc36Q6PDM4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc36Q6PDM4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc36Q6PDM4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc36Q6PDM4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc36Q6PDM4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc36Q6PDM4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc36Q6PDM4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc36Q6PDM4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc36Q6PDM4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ccdc36Q6PDM4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc36Q6PDM4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc36Q6PDM4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc36Q6PDM4 Gm24970-201ENSMUST00000175582 82 ntBASIC19.33■□□□□ 0.68
Ccdc36Q6PDM4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Ccdc36Q6PDM4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc36Q6PDM4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc36Q6PDM4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc36Q6PDM4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc36Q6PDM4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc36Q6PDM4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc36Q6PDM4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc36Q6PDM4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc36Q6PDM4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc36Q6PDM4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc36Q6PDM4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc36Q6PDM4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc36Q6PDM4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc36Q6PDM4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc36Q6PDM4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc36Q6PDM4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc36Q6PDM4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc36Q6PDM4 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.26■□□□□ 0.67
Ccdc36Q6PDM4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc36Q6PDM4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc36Q6PDM4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc36Q6PDM4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc36Q6PDM4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc36Q6PDM4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc36Q6PDM4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc36Q6PDM4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Ccdc36Q6PDM4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc36Q6PDM4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc36Q6PDM4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc36Q6PDM4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms