Protein–RNA interactions for Protein: Q6NXZ1

Krba1, Protein KRBA1, mousemouse

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krba1Q6NXZ1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Krba1Q6NXZ1 Zxda-201ENSMUST00000117281 2621 ntBASIC24.08■■□□□ 1.44
Krba1Q6NXZ1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Krba1Q6NXZ1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Krba1Q6NXZ1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.07■■□□□ 1.44
Krba1Q6NXZ1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Krba1Q6NXZ1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Krba1Q6NXZ1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Krba1Q6NXZ1 Gm22567-201ENSMUST00000175542 342 ntBASIC24.05■■□□□ 1.44
Krba1Q6NXZ1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Krba1Q6NXZ1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Krba1Q6NXZ1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Krba1Q6NXZ1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Krba1Q6NXZ1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Krba1Q6NXZ1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Krba1Q6NXZ1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Krba1Q6NXZ1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.03■■□□□ 1.44
Krba1Q6NXZ1 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.03■■□□□ 1.44
Krba1Q6NXZ1 Terc-201ENSMUST00000082862 423 ntBASIC24.03■■□□□ 1.44
Krba1Q6NXZ1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.02■■□□□ 1.44
Krba1Q6NXZ1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.02■■□□□ 1.44
Krba1Q6NXZ1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Krba1Q6NXZ1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
Krba1Q6NXZ1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Krba1Q6NXZ1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.01■■□□□ 1.43
Krba1Q6NXZ1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.01■■□□□ 1.43
Krba1Q6NXZ1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24■■□□□ 1.43
Krba1Q6NXZ1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Krba1Q6NXZ1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24■■□□□ 1.43
Krba1Q6NXZ1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Krba1Q6NXZ1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24■■□□□ 1.43
Krba1Q6NXZ1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Krba1Q6NXZ1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Krba1Q6NXZ1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Krba1Q6NXZ1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Krba1Q6NXZ1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Krba1Q6NXZ1 Gm15039-201ENSMUST00000118914 875 ntBASIC23.97■■□□□ 1.43
Krba1Q6NXZ1 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.97■■□□□ 1.43
Krba1Q6NXZ1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Krba1Q6NXZ1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Krba1Q6NXZ1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.95■■□□□ 1.43
Krba1Q6NXZ1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Krba1Q6NXZ1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Krba1Q6NXZ1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Krba1Q6NXZ1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Krba1Q6NXZ1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Krba1Q6NXZ1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
Krba1Q6NXZ1 Gm15546-201ENSMUST00000122095 826 ntBASIC23.93■■□□□ 1.42
Krba1Q6NXZ1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Krba1Q6NXZ1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Krba1Q6NXZ1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Krba1Q6NXZ1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.91■■□□□ 1.42
Krba1Q6NXZ1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Krba1Q6NXZ1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Krba1Q6NXZ1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Krba1Q6NXZ1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Krba1Q6NXZ1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Krba1Q6NXZ1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Krba1Q6NXZ1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Krba1Q6NXZ1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Krba1Q6NXZ1 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.88■■□□□ 1.41
Krba1Q6NXZ1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Krba1Q6NXZ1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Krba1Q6NXZ1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Krba1Q6NXZ1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Krba1Q6NXZ1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
Krba1Q6NXZ1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Krba1Q6NXZ1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.86■■□□□ 1.41
Krba1Q6NXZ1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Krba1Q6NXZ1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.85■■□□□ 1.41
Krba1Q6NXZ1 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.85■■□□□ 1.41
Krba1Q6NXZ1 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.85■■□□□ 1.41
Krba1Q6NXZ1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Krba1Q6NXZ1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.84■■□□□ 1.41
Krba1Q6NXZ1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Krba1Q6NXZ1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Krba1Q6NXZ1 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.83■■□□□ 1.41
Krba1Q6NXZ1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Krba1Q6NXZ1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Krba1Q6NXZ1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Krba1Q6NXZ1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Krba1Q6NXZ1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.82■■□□□ 1.4
Krba1Q6NXZ1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.82■■□□□ 1.4
Krba1Q6NXZ1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Krba1Q6NXZ1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Krba1Q6NXZ1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Krba1Q6NXZ1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Krba1Q6NXZ1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Krba1Q6NXZ1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Krba1Q6NXZ1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Krba1Q6NXZ1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Krba1Q6NXZ1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Krba1Q6NXZ1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Krba1Q6NXZ1 Gm44428-201ENSMUST00000204474 874 ntBASIC23.8■■□□□ 1.4
Krba1Q6NXZ1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Krba1Q6NXZ1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Krba1Q6NXZ1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Krba1Q6NXZ1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Krba1Q6NXZ1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.79■■□□□ 1.4
Krba1Q6NXZ1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms