Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
Pcdhga7Q6DD96 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.24■■□□□ 1.15
Pcdhga7Q6DD96 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhga7Q6DD96 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhga7Q6DD96 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.23■■□□□ 1.15
Pcdhga7Q6DD96 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhga7Q6DD96 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga7Q6DD96 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga7Q6DD96 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.22■■□□□ 1.15
Pcdhga7Q6DD96 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga7Q6DD96 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga7Q6DD96 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhga7Q6DD96 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Pcdhga7Q6DD96 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdhga7Q6DD96 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Pcdhga7Q6DD96 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhga7Q6DD96 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.21■■□□□ 1.15
Pcdhga7Q6DD96 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga7Q6DD96 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga7Q6DD96 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga7Q6DD96 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga7Q6DD96 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhga7Q6DD96 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.19■■□□□ 1.14
Pcdhga7Q6DD96 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhga7Q6DD96 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdhga7Q6DD96 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga7Q6DD96 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga7Q6DD96 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdhga7Q6DD96 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga7Q6DD96 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhga7Q6DD96 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhga7Q6DD96 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhga7Q6DD96 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhga7Q6DD96 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhga7Q6DD96 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga7Q6DD96 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga7Q6DD96 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.15■■□□□ 1.14
Pcdhga7Q6DD96 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga7Q6DD96 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga7Q6DD96 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhga7Q6DD96 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhga7Q6DD96 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga7Q6DD96 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga7Q6DD96 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Pcdhga7Q6DD96 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga7Q6DD96 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Pcdhga7Q6DD96 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhga7Q6DD96 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhga7Q6DD96 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Pcdhga7Q6DD96 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.11■■□□□ 1.13
Pcdhga7Q6DD96 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Pcdhga7Q6DD96 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Pcdhga7Q6DD96 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga7Q6DD96 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga7Q6DD96 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga7Q6DD96 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
Pcdhga7Q6DD96 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga7Q6DD96 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga7Q6DD96 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhga7Q6DD96 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.08■■□□□ 1.13
Pcdhga7Q6DD96 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga7Q6DD96 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga7Q6DD96 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcdhga7Q6DD96 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga7Q6DD96 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga7Q6DD96 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga7Q6DD96 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcdhga7Q6DD96 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Pcdhga7Q6DD96 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.07■■□□□ 1.12
Pcdhga7Q6DD96 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga7Q6DD96 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Pcdhga7Q6DD96 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.06■■□□□ 1.12
Pcdhga7Q6DD96 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Pcdhga7Q6DD96 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga7Q6DD96 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga7Q6DD96 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.05■■□□□ 1.12
Pcdhga7Q6DD96 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga7Q6DD96 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga7Q6DD96 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Pcdhga7Q6DD96 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga7Q6DD96 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga7Q6DD96 Gm37136-201ENSMUST00000194368 194 ntBASIC22.04■■□□□ 1.12
Pcdhga7Q6DD96 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.04■■□□□ 1.12
Pcdhga7Q6DD96 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.04■■□□□ 1.12
Pcdhga7Q6DD96 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga7Q6DD96 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga7Q6DD96 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga7Q6DD96 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga7Q6DD96 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.03■■□□□ 1.12
Pcdhga7Q6DD96 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.03■■□□□ 1.12
Pcdhga7Q6DD96 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga7Q6DD96 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
Pcdhga7Q6DD96 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Pcdhga7Q6DD96 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.02■■□□□ 1.12
Pcdhga7Q6DD96 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga7Q6DD96 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhga7Q6DD96 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Pcdhga7Q6DD96 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga7Q6DD96 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga7Q6DD96 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms