Protein–RNA interactions for Protein: Q5TIS6

Noto, Homeobox protein notochord, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NotoQ5TIS6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NotoQ5TIS6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NotoQ5TIS6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NotoQ5TIS6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NotoQ5TIS6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NotoQ5TIS6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NotoQ5TIS6 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.85■□□□□ 0.61
NotoQ5TIS6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NotoQ5TIS6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NotoQ5TIS6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.84■□□□□ 0.61
NotoQ5TIS6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NotoQ5TIS6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NotoQ5TIS6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.83■□□□□ 0.6
NotoQ5TIS6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NotoQ5TIS6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NotoQ5TIS6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NotoQ5TIS6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NotoQ5TIS6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.82■□□□□ 0.6
NotoQ5TIS6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.82■□□□□ 0.6
NotoQ5TIS6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NotoQ5TIS6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NotoQ5TIS6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NotoQ5TIS6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NotoQ5TIS6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NotoQ5TIS6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NotoQ5TIS6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.81■□□□□ 0.6
NotoQ5TIS6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NotoQ5TIS6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NotoQ5TIS6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NotoQ5TIS6 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.8■□□□□ 0.6
NotoQ5TIS6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NotoQ5TIS6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NotoQ5TIS6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NotoQ5TIS6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.8■□□□□ 0.6
NotoQ5TIS6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
NotoQ5TIS6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NotoQ5TIS6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NotoQ5TIS6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NotoQ5TIS6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NotoQ5TIS6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NotoQ5TIS6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NotoQ5TIS6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NotoQ5TIS6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NotoQ5TIS6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NotoQ5TIS6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NotoQ5TIS6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.77■□□□□ 0.6
NotoQ5TIS6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NotoQ5TIS6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NotoQ5TIS6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.77■□□□□ 0.6
NotoQ5TIS6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NotoQ5TIS6 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.76■□□□□ 0.59
NotoQ5TIS6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NotoQ5TIS6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NotoQ5TIS6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NotoQ5TIS6 Gm6821-201ENSMUST00000107540 542 ntBASIC18.75■□□□□ 0.59
NotoQ5TIS6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.75■□□□□ 0.59
NotoQ5TIS6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
NotoQ5TIS6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NotoQ5TIS6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NotoQ5TIS6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NotoQ5TIS6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NotoQ5TIS6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NotoQ5TIS6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NotoQ5TIS6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NotoQ5TIS6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.73■□□□□ 0.59
NotoQ5TIS6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NotoQ5TIS6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NotoQ5TIS6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NotoQ5TIS6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NotoQ5TIS6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NotoQ5TIS6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NotoQ5TIS6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NotoQ5TIS6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NotoQ5TIS6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NotoQ5TIS6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NotoQ5TIS6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NotoQ5TIS6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.71■□□□□ 0.59
NotoQ5TIS6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NotoQ5TIS6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.71■□□□□ 0.59
NotoQ5TIS6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NotoQ5TIS6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NotoQ5TIS6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NotoQ5TIS6 Gm8503-201ENSMUST00000118131 455 ntBASIC18.7■□□□□ 0.58
NotoQ5TIS6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NotoQ5TIS6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.7■□□□□ 0.58
NotoQ5TIS6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.7■□□□□ 0.58
NotoQ5TIS6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NotoQ5TIS6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NotoQ5TIS6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
NotoQ5TIS6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NotoQ5TIS6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NotoQ5TIS6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NotoQ5TIS6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NotoQ5TIS6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NotoQ5TIS6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NotoQ5TIS6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NotoQ5TIS6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.67■□□□□ 0.58
NotoQ5TIS6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.67■□□□□ 0.58
NotoQ5TIS6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NotoQ5TIS6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms