Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-3Q5R1E6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-3Q5R1E6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav6-3Q5R1E6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trav6-3Q5R1E6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-3Q5R1E6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-3Q5R1E6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-3Q5R1E6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-3Q5R1E6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-3Q5R1E6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav6-3Q5R1E6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-3Q5R1E6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav6-3Q5R1E6 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.42■□□□□ 0.54
Trav6-3Q5R1E6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav6-3Q5R1E6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav6-3Q5R1E6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.41■□□□□ 0.54
Trav6-3Q5R1E6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.41■□□□□ 0.54
Trav6-3Q5R1E6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.41■□□□□ 0.54
Trav6-3Q5R1E6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-3Q5R1E6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-3Q5R1E6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav6-3Q5R1E6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trav6-3Q5R1E6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-3Q5R1E6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-3Q5R1E6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-3Q5R1E6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-3Q5R1E6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav6-3Q5R1E6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-3Q5R1E6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-3Q5R1E6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav6-3Q5R1E6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav6-3Q5R1E6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav6-3Q5R1E6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-3Q5R1E6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-3Q5R1E6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-3Q5R1E6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-3Q5R1E6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-3Q5R1E6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav6-3Q5R1E6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6-3Q5R1E6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6-3Q5R1E6 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.36■□□□□ 0.53
Trav6-3Q5R1E6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav6-3Q5R1E6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav6-3Q5R1E6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-3Q5R1E6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav6-3Q5R1E6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.35■□□□□ 0.53
Trav6-3Q5R1E6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav6-3Q5R1E6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-3Q5R1E6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-3Q5R1E6 Gm37136-201ENSMUST00000194368 194 ntBASIC18.34■□□□□ 0.53
Trav6-3Q5R1E6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trav6-3Q5R1E6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav6-3Q5R1E6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav6-3Q5R1E6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav6-3Q5R1E6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-3Q5R1E6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav6-3Q5R1E6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.33■□□□□ 0.52
Trav6-3Q5R1E6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Trav6-3Q5R1E6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.32■□□□□ 0.52
Trav6-3Q5R1E6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.32■□□□□ 0.52
Trav6-3Q5R1E6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-3Q5R1E6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trav6-3Q5R1E6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav6-3Q5R1E6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Trav6-3Q5R1E6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav6-3Q5R1E6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-3Q5R1E6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav6-3Q5R1E6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Trav6-3Q5R1E6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.3■□□□□ 0.52
Trav6-3Q5R1E6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trav6-3Q5R1E6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-3Q5R1E6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.29■□□□□ 0.52
Trav6-3Q5R1E6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-3Q5R1E6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav6-3Q5R1E6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-3Q5R1E6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-3Q5R1E6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-3Q5R1E6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav6-3Q5R1E6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-3Q5R1E6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-3Q5R1E6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav6-3Q5R1E6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trav6-3Q5R1E6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trav6-3Q5R1E6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-3Q5R1E6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-3Q5R1E6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.26■□□□□ 0.51
Trav6-3Q5R1E6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav6-3Q5R1E6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.26■□□□□ 0.51
Trav6-3Q5R1E6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-3Q5R1E6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-3Q5R1E6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav6-3Q5R1E6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav6-3Q5R1E6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav6-3Q5R1E6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-3Q5R1E6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-3Q5R1E6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-3Q5R1E6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.24■□□□□ 0.51
Trav6-3Q5R1E6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav6-3Q5R1E6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.23■□□□□ 0.51
Trav6-3Q5R1E6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms