Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col10a1Q05306 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Col10a1Q05306 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col10a1Q05306 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col10a1Q05306 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col10a1Q05306 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.13■□□□□ 0.97
Col10a1Q05306 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col10a1Q05306 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col10a1Q05306 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col10a1Q05306 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Col10a1Q05306 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col10a1Q05306 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Col10a1Q05306 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col10a1Q05306 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.11■□□□□ 0.97
Col10a1Q05306 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col10a1Q05306 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Col10a1Q05306 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Col10a1Q05306 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Col10a1Q05306 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.09■□□□□ 0.97
Col10a1Q05306 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col10a1Q05306 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col10a1Q05306 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Col10a1Q05306 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.09■□□□□ 0.97
Col10a1Q05306 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col10a1Q05306 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col10a1Q05306 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col10a1Q05306 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.08■□□□□ 0.97
Col10a1Q05306 Mir3960-201ENSMUST00000198213 73 ntBASIC21.08■□□□□ 0.97
Col10a1Q05306 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col10a1Q05306 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Col10a1Q05306 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col10a1Q05306 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col10a1Q05306 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.06■□□□□ 0.96
Col10a1Q05306 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.06■□□□□ 0.96
Col10a1Q05306 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col10a1Q05306 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col10a1Q05306 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col10a1Q05306 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col10a1Q05306 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Col10a1Q05306 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Col10a1Q05306 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.05■□□□□ 0.96
Col10a1Q05306 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Col10a1Q05306 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col10a1Q05306 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.04■□□□□ 0.96
Col10a1Q05306 Gm6311-201ENSMUST00000073790 878 ntBASIC21.04■□□□□ 0.96
Col10a1Q05306 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col10a1Q05306 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.03■□□□□ 0.96
Col10a1Q05306 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col10a1Q05306 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.02■□□□□ 0.96
Col10a1Q05306 Gm45364-201ENSMUST00000210883 159 ntBASIC21.02■□□□□ 0.96
Col10a1Q05306 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col10a1Q05306 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col10a1Q05306 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col10a1Q05306 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col10a1Q05306 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Col10a1Q05306 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col10a1Q05306 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col10a1Q05306 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col10a1Q05306 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col10a1Q05306 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col10a1Q05306 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col10a1Q05306 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Col10a1Q05306 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col10a1Q05306 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.01■□□□□ 0.95
Col10a1Q05306 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col10a1Q05306 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21■□□□□ 0.95
Col10a1Q05306 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col10a1Q05306 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.99■□□□□ 0.95
Col10a1Q05306 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col10a1Q05306 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col10a1Q05306 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col10a1Q05306 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Col10a1Q05306 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col10a1Q05306 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.98■□□□□ 0.95
Col10a1Q05306 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col10a1Q05306 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Col10a1Q05306 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.97■□□□□ 0.95
Col10a1Q05306 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col10a1Q05306 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col10a1Q05306 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col10a1Q05306 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col10a1Q05306 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col10a1Q05306 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Col10a1Q05306 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col10a1Q05306 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Col10a1Q05306 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col10a1Q05306 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col10a1Q05306 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col10a1Q05306 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col10a1Q05306 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col10a1Q05306 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.94■□□□□ 0.94
Col10a1Q05306 Gm9812-201ENSMUST00000061934 968 ntBASIC20.94■□□□□ 0.94
Col10a1Q05306 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col10a1Q05306 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col10a1Q05306 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Col10a1Q05306 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col10a1Q05306 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.93■□□□□ 0.94
Col10a1Q05306 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col10a1Q05306 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col10a1Q05306 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms