Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm6P62313 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm6P62313 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lsm6P62313 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm6P62313 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lsm6P62313 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Lsm6P62313 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm6P62313 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm6P62313 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lsm6P62313 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm6P62313 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm6P62313 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm6P62313 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm6P62313 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm6P62313 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm6P62313 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lsm6P62313 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Lsm6P62313 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm6P62313 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm6P62313 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm6P62313 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm6P62313 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lsm6P62313 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm6P62313 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm6P62313 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lsm6P62313 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm6P62313 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm6P62313 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm6P62313 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm6P62313 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.08■□□□□ 0.81
Lsm6P62313 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm6P62313 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm6P62313 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm6P62313 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm6P62313 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm6P62313 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm6P62313 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm6P62313 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm6P62313 Gm7432-201ENSMUST00000210343 879 ntBASIC20.05■□□□□ 0.8
Lsm6P62313 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.05■□□□□ 0.8
Lsm6P62313 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm6P62313 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.04■□□□□ 0.8
Lsm6P62313 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm6P62313 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm6P62313 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm6P62313 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm6P62313 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Lsm6P62313 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm6P62313 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm6P62313 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm6P62313 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm6P62313 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Lsm6P62313 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Lsm6P62313 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Lsm6P62313 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Lsm6P62313 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.01■□□□□ 0.79
Lsm6P62313 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.01■□□□□ 0.79
Lsm6P62313 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.01■□□□□ 0.79
Lsm6P62313 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm6P62313 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm6P62313 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm6P62313 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm6P62313 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm6P62313 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm6P62313 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lsm6P62313 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm6P62313 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm6P62313 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Lsm6P62313 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm6P62313 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.99■□□□□ 0.79
Lsm6P62313 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Lsm6P62313 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Lsm6P62313 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm6P62313 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm6P62313 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Lsm6P62313 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm6P62313 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm6P62313 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm6P62313 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm6P62313 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm6P62313 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.96■□□□□ 0.79
Lsm6P62313 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.96■□□□□ 0.79
Lsm6P62313 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm6P62313 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm6P62313 Gm11599-201ENSMUST00000118720 878 ntBASIC19.95■□□□□ 0.78
Lsm6P62313 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.95■□□□□ 0.78
Lsm6P62313 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.95■□□□□ 0.78
Lsm6P62313 Gm4799-201ENSMUST00000095396 657 ntBASIC19.95■□□□□ 0.78
Lsm6P62313 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm6P62313 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm6P62313 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm6P62313 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.95■□□□□ 0.78
Lsm6P62313 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.95■□□□□ 0.78
Lsm6P62313 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm6P62313 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Lsm6P62313 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.93■□□□□ 0.78
Lsm6P62313 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm6P62313 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm6P62313 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm6P62313 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms