Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Tm6sf1P58749 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.6■■■□□ 2.17
Tm6sf1P58749 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Tm6sf1P58749 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Tm6sf1P58749 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
Tm6sf1P58749 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.59■■■□□ 2.17
Tm6sf1P58749 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tm6sf1P58749 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tm6sf1P58749 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.58■■■□□ 2.16
Tm6sf1P58749 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.57■■■□□ 2.16
Tm6sf1P58749 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Tm6sf1P58749 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Tm6sf1P58749 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Tm6sf1P58749 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.56■■■□□ 2.16
Tm6sf1P58749 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Tm6sf1P58749 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
Tm6sf1P58749 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
Tm6sf1P58749 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Tm6sf1P58749 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tm6sf1P58749 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.54■■■□□ 2.16
Tm6sf1P58749 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Tm6sf1P58749 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Tm6sf1P58749 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.54■■■□□ 2.16
Tm6sf1P58749 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tm6sf1P58749 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
Tm6sf1P58749 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tm6sf1P58749 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Tm6sf1P58749 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Tm6sf1P58749 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Tm6sf1P58749 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.51■■■□□ 2.15
Tm6sf1P58749 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tm6sf1P58749 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Tm6sf1P58749 Gm4799-201ENSMUST00000095396 657 ntBASIC28.5■■■□□ 2.15
Tm6sf1P58749 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tm6sf1P58749 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Tm6sf1P58749 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tm6sf1P58749 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
Tm6sf1P58749 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Tm6sf1P58749 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Tm6sf1P58749 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Tm6sf1P58749 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Tm6sf1P58749 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
Tm6sf1P58749 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Tm6sf1P58749 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Tm6sf1P58749 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Tm6sf1P58749 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Tm6sf1P58749 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Tm6sf1P58749 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Tm6sf1P58749 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.45■■■□□ 2.14
Tm6sf1P58749 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Tm6sf1P58749 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Tm6sf1P58749 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Tm6sf1P58749 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Tm6sf1P58749 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.44■■■□□ 2.14
Tm6sf1P58749 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Tm6sf1P58749 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Tm6sf1P58749 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Tm6sf1P58749 Mir3960-201ENSMUST00000198213 73 ntBASIC28.41■■■□□ 2.14
Tm6sf1P58749 Gm45364-201ENSMUST00000210883 159 ntBASIC28.41■■■□□ 2.14
Tm6sf1P58749 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.41■■■□□ 2.14
Tm6sf1P58749 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.41■■■□□ 2.14
Tm6sf1P58749 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Tm6sf1P58749 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.39■■■□□ 2.14
Tm6sf1P58749 Gm9812-201ENSMUST00000061934 968 ntBASIC28.39■■■□□ 2.14
Tm6sf1P58749 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Tm6sf1P58749 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.38■■■□□ 2.13
Tm6sf1P58749 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.38■■■□□ 2.13
Tm6sf1P58749 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Tm6sf1P58749 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tm6sf1P58749 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.37■■■□□ 2.13
Tm6sf1P58749 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Tm6sf1P58749 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Tm6sf1P58749 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
Tm6sf1P58749 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Tm6sf1P58749 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Tm6sf1P58749 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Tm6sf1P58749 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Tm6sf1P58749 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Tm6sf1P58749 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.34■■■□□ 2.13
Tm6sf1P58749 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.33■■■□□ 2.13
Tm6sf1P58749 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tm6sf1P58749 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tm6sf1P58749 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tm6sf1P58749 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Tm6sf1P58749 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Tm6sf1P58749 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
Tm6sf1P58749 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Tm6sf1P58749 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tm6sf1P58749 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tm6sf1P58749 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tm6sf1P58749 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Tm6sf1P58749 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.31■■■□□ 2.12
Tm6sf1P58749 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tm6sf1P58749 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Tm6sf1P58749 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.3■■■□□ 2.12
Tm6sf1P58749 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.3■■■□□ 2.12
Tm6sf1P58749 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tm6sf1P58749 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tm6sf1P58749 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Tm6sf1P58749 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 161 ms