Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Srp9P49962 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.32■□□□□ 0.68
Srp9P49962 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srp9P49962 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Srp9P49962 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srp9P49962 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srp9P49962 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srp9P49962 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srp9P49962 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.31■□□□□ 0.68
Srp9P49962 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Srp9P49962 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Srp9P49962 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srp9P49962 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srp9P49962 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.3■□□□□ 0.68
Srp9P49962 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Srp9P49962 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srp9P49962 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Srp9P49962 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Srp9P49962 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Srp9P49962 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srp9P49962 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Srp9P49962 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srp9P49962 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Srp9P49962 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Srp9P49962 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Srp9P49962 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.27■□□□□ 0.68
Srp9P49962 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Srp9P49962 Gm30023-201ENSMUST00000197970 889 ntBASIC19.27■□□□□ 0.68
Srp9P49962 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Srp9P49962 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Srp9P49962 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Srp9P49962 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Srp9P49962 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Srp9P49962 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.26■□□□□ 0.67
Srp9P49962 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Srp9P49962 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.26■□□□□ 0.67
Srp9P49962 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Srp9P49962 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Srp9P49962 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Srp9P49962 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Srp9P49962 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Srp9P49962 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Srp9P49962 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp9P49962 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp9P49962 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Srp9P49962 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp9P49962 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp9P49962 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp9P49962 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp9P49962 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.25■□□□□ 0.67
Srp9P49962 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Srp9P49962 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp9P49962 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Srp9P49962 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.24■□□□□ 0.67
Srp9P49962 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Srp9P49962 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Srp9P49962 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp9P49962 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.23■□□□□ 0.67
Srp9P49962 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp9P49962 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp9P49962 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Srp9P49962 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.23■□□□□ 0.67
Srp9P49962 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.23■□□□□ 0.67
Srp9P49962 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.23■□□□□ 0.67
Srp9P49962 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Srp9P49962 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Srp9P49962 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Srp9P49962 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Srp9P49962 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Srp9P49962 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.22■□□□□ 0.67
Srp9P49962 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srp9P49962 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srp9P49962 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srp9P49962 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Srp9P49962 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Srp9P49962 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Srp9P49962 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp9P49962 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Srp9P49962 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp9P49962 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp9P49962 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp9P49962 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.2■□□□□ 0.66
Srp9P49962 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Srp9P49962 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp9P49962 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp9P49962 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Srp9P49962 Nkain2-201ENSMUST00000092602 558 ntBASIC19.19■□□□□ 0.66
Srp9P49962 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Srp9P49962 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Srp9P49962 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Srp9P49962 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Srp9P49962 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Srp9P49962 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srp9P49962 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Srp9P49962 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Srp9P49962 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Srp9P49962 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.17■□□□□ 0.66
Srp9P49962 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Srp9P49962 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Srp9P49962 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms