Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc1P07903 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc1P07903 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ercc1P07903 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.14■□□□□ 0.65
Ercc1P07903 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc1P07903 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc1P07903 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ercc1P07903 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.13■□□□□ 0.65
Ercc1P07903 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc1P07903 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ercc1P07903 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.12■□□□□ 0.65
Ercc1P07903 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ercc1P07903 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ercc1P07903 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ercc1P07903 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ercc1P07903 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ercc1P07903 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ercc1P07903 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ercc1P07903 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ercc1P07903 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.1■□□□□ 0.65
Ercc1P07903 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.09■□□□□ 0.65
Ercc1P07903 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ercc1P07903 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ercc1P07903 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.09■□□□□ 0.65
Ercc1P07903 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ercc1P07903 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ercc1P07903 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.08■□□□□ 0.65
Ercc1P07903 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ercc1P07903 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ercc1P07903 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc1P07903 Particl-201ENSMUST00000205370 1560 ntBASIC19.06■□□□□ 0.64
Ercc1P07903 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc1P07903 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc1P07903 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ercc1P07903 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc1P07903 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Ercc1P07903 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.05■□□□□ 0.64
Ercc1P07903 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc1P07903 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc1P07903 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc1P07903 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ercc1P07903 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.04■□□□□ 0.64
Ercc1P07903 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.04■□□□□ 0.64
Ercc1P07903 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ercc1P07903 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc1P07903 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ercc1P07903 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ercc1P07903 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc1P07903 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc1P07903 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc1P07903 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc1P07903 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc1P07903 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc1P07903 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ercc1P07903 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc1P07903 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc1P07903 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc1P07903 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc1P07903 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc1P07903 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc1P07903 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc1P07903 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc1P07903 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc1P07903 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc1P07903 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.98■□□□□ 0.63
Ercc1P07903 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc1P07903 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc1P07903 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc1P07903 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc1P07903 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.98■□□□□ 0.63
Ercc1P07903 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc1P07903 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc1P07903 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc1P07903 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc1P07903 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.97■□□□□ 0.63
Ercc1P07903 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc1P07903 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ercc1P07903 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc1P07903 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc1P07903 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc1P07903 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.96■□□□□ 0.63
Ercc1P07903 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc1P07903 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc1P07903 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.96■□□□□ 0.63
Ercc1P07903 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc1P07903 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ercc1P07903 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc1P07903 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ercc1P07903 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc1P07903 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc1P07903 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.95■□□□□ 0.62
Ercc1P07903 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc1P07903 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc1P07903 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ercc1P07903 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc1P07903 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc1P07903 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc1P07903 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc1P07903 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ercc1P07903 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms