Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.91■□□□□ 0.46
P04944 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
P04944 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04944 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
P04944 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04944 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
P04944 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04944 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.9■□□□□ 0.46
P04944 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
P04944 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
P04944 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04944 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
P04944 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
P04944 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
P04944 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
P04944 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04944 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.88■□□□□ 0.45
P04944 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.88■□□□□ 0.45
P04944 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04944 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04944 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04944 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
P04944 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.87■□□□□ 0.45
P04944 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
P04944 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
P04944 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
P04944 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
P04944 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
P04944 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
P04944 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.86■□□□□ 0.45
P04944 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
P04944 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
P04944 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
P04944 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
P04944 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
P04944 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
P04944 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
P04944 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
P04944 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
P04944 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
P04944 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.83■□□□□ 0.44
P04944 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.83■□□□□ 0.44
P04944 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
P04944 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
P04944 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04944 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
P04944 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04944 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
P04944 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04944 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04944 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04944 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04944 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04944 Gm6821-201ENSMUST00000107540 542 ntBASIC17.81■□□□□ 0.44
P04944 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
P04944 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
P04944 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
P04944 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.8■□□□□ 0.44
P04944 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04944 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
P04944 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04944 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04944 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P04944 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
P04944 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04944 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04944 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P04944 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.78■□□□□ 0.44
P04944 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.78■□□□□ 0.44
P04944 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.78■□□□□ 0.44
P04944 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P04944 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
P04944 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.78■□□□□ 0.44
P04944 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
P04944 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
P04944 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
P04944 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P04944 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04944 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P04944 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P04944 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04944 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P04944 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04944 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.74■□□□□ 0.43
P04944 Gm8503-201ENSMUST00000118131 455 ntBASIC17.74■□□□□ 0.43
P04944 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04944 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04944 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04944 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04944 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04944 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04944 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.73■□□□□ 0.43
P04944 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
P04944 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.73■□□□□ 0.43
P04944 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
P04944 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04944 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04944 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04944 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04944 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 141.2 ms