Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04940 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04940 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.77■□□□□ 0.6
P04940 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04940 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04940 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04940 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04940 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04940 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P04940 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04940 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04940 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
P04940 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P04940 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04940 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04940 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04940 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P04940 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P04940 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P04940 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P04940 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P04940 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
P04940 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.72■□□□□ 0.59
P04940 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04940 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.72■□□□□ 0.59
P04940 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.71■□□□□ 0.59
P04940 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
P04940 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04940 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
P04940 Gm7432-201ENSMUST00000210343 879 ntBASIC18.71■□□□□ 0.59
P04940 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04940 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
P04940 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
P04940 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04940 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
P04940 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04940 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04940 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04940 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04940 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.68■□□□□ 0.58
P04940 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.68■□□□□ 0.58
P04940 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04940 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P04940 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04940 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
P04940 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.66■□□□□ 0.58
P04940 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04940 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04940 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
P04940 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04940 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
P04940 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.65■□□□□ 0.58
P04940 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04940 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
P04940 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
P04940 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04940 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04940 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04940 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.64■□□□□ 0.57
P04940 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04940 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P04940 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.64■□□□□ 0.57
P04940 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P04940 Gm11599-201ENSMUST00000118720 878 ntBASIC18.63■□□□□ 0.57
P04940 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P04940 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P04940 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P04940 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P04940 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04940 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04940 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04940 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04940 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04940 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.61■□□□□ 0.57
P04940 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P04940 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04940 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
P04940 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04940 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.6■□□□□ 0.57
P04940 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04940 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04940 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P04940 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P04940 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.59■□□□□ 0.57
P04940 Gm4799-201ENSMUST00000095396 657 ntBASIC18.59■□□□□ 0.57
P04940 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04940 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04940 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04940 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04940 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04940 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04940 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P04940 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
P04940 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
P04940 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04940 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04940 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04940 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04940 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
P04940 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms