Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PrnpP04925 Terc-201ENSMUST00000082862 423 ntBASIC24.34■■□□□ 1.49
PrnpP04925 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PrnpP04925 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.33■■□□□ 1.49
PrnpP04925 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.33■■□□□ 1.49
PrnpP04925 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PrnpP04925 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PrnpP04925 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PrnpP04925 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PrnpP04925 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PrnpP04925 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PrnpP04925 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PrnpP04925 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PrnpP04925 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PrnpP04925 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PrnpP04925 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PrnpP04925 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PrnpP04925 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PrnpP04925 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PrnpP04925 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PrnpP04925 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PrnpP04925 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PrnpP04925 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.28■■□□□ 1.48
PrnpP04925 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PrnpP04925 Gm10420-201ENSMUST00000121713 882 ntBASIC24.27■■□□□ 1.48
PrnpP04925 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.27■■□□□ 1.48
PrnpP04925 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PrnpP04925 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PrnpP04925 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PrnpP04925 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
PrnpP04925 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PrnpP04925 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PrnpP04925 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PrnpP04925 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PrnpP04925 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PrnpP04925 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
PrnpP04925 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
PrnpP04925 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PrnpP04925 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.24■■□□□ 1.47
PrnpP04925 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PrnpP04925 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PrnpP04925 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
PrnpP04925 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PrnpP04925 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PrnpP04925 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.22■■□□□ 1.47
PrnpP04925 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PrnpP04925 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PrnpP04925 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.21■■□□□ 1.47
PrnpP04925 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PrnpP04925 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PrnpP04925 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PrnpP04925 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PrnpP04925 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PrnpP04925 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PrnpP04925 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.18■■□□□ 1.46
PrnpP04925 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PrnpP04925 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.18■■□□□ 1.46
PrnpP04925 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.17■■□□□ 1.46
PrnpP04925 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PrnpP04925 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
PrnpP04925 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.16■■□□□ 1.46
PrnpP04925 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PrnpP04925 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PrnpP04925 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PrnpP04925 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
PrnpP04925 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PrnpP04925 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PrnpP04925 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PrnpP04925 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
PrnpP04925 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PrnpP04925 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.14■■□□□ 1.45
PrnpP04925 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PrnpP04925 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PrnpP04925 Gm5921-201ENSMUST00000075898 882 ntBASIC24.14■■□□□ 1.45
PrnpP04925 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PrnpP04925 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.14■■□□□ 1.45
PrnpP04925 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PrnpP04925 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PrnpP04925 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PrnpP04925 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PrnpP04925 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
PrnpP04925 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PrnpP04925 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PrnpP04925 Gm44428-201ENSMUST00000204474 874 ntBASIC24.1■■□□□ 1.45
PrnpP04925 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PrnpP04925 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.1■■□□□ 1.45
PrnpP04925 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
PrnpP04925 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PrnpP04925 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.09■■□□□ 1.45
PrnpP04925 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.09■■□□□ 1.45
PrnpP04925 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PrnpP04925 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PrnpP04925 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
PrnpP04925 Gm5812-201ENSMUST00000061073 957 ntBASIC24.07■■□□□ 1.44
PrnpP04925 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.07■■□□□ 1.44
PrnpP04925 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
PrnpP04925 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
PrnpP04925 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
PrnpP04925 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
PrnpP04925 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms