Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm10226O88253 Gm9806-201ENSMUST00000051080 552 ntBASIC17.9■□□□□ 0.46
Gm10226O88253 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm10226O88253 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm10226O88253 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm10226O88253 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm10226O88253 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Gm10226O88253 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm10226O88253 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm10226O88253 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm10226O88253 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Gm10226O88253 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.88■□□□□ 0.45
Gm10226O88253 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm10226O88253 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm10226O88253 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.88■□□□□ 0.45
Gm10226O88253 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.88■□□□□ 0.45
Gm10226O88253 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm10226O88253 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm10226O88253 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.87■□□□□ 0.45
Gm10226O88253 Gm11687-201ENSMUST00000118911 886 ntBASIC17.86■□□□□ 0.45
Gm10226O88253 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm10226O88253 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm10226O88253 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gm10226O88253 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm10226O88253 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm10226O88253 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm10226O88253 Gm16437-201ENSMUST00000025669 507 ntBASIC17.84■□□□□ 0.45
Gm10226O88253 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm10226O88253 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.84■□□□□ 0.45
Gm10226O88253 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Gm10226O88253 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Gm10226O88253 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Gm10226O88253 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Gm10226O88253 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm10226O88253 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gm10226O88253 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm10226O88253 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm10226O88253 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm10226O88253 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm10226O88253 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm10226O88253 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm10226O88253 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm10226O88253 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm10226O88253 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm10226O88253 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.8■□□□□ 0.44
Gm10226O88253 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm10226O88253 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm10226O88253 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm10226O88253 Terc-201ENSMUST00000082862 423 ntBASIC17.8■□□□□ 0.44
Gm10226O88253 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Gm10226O88253 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm10226O88253 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Gm10226O88253 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm10226O88253 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.79■□□□□ 0.44
Gm10226O88253 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm10226O88253 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm10226O88253 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm10226O88253 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm10226O88253 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.78■□□□□ 0.44
Gm10226O88253 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm10226O88253 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm10226O88253 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm10226O88253 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Gm10226O88253 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.77■□□□□ 0.44
Gm10226O88253 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm10226O88253 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm10226O88253 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm10226O88253 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm10226O88253 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm10226O88253 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm10226O88253 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Gm10226O88253 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm10226O88253 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.76■□□□□ 0.43
Gm10226O88253 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm10226O88253 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm10226O88253 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm10226O88253 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gm10226O88253 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm10226O88253 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Gm10226O88253 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm10226O88253 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm10226O88253 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm10226O88253 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gm10226O88253 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm10226O88253 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm10226O88253 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm10226O88253 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gm10226O88253 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm10226O88253 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.72■□□□□ 0.43
Gm10226O88253 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm10226O88253 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Gm10226O88253 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm10226O88253 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm10226O88253 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.71■□□□□ 0.43
Gm10226O88253 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm10226O88253 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gm10226O88253 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm10226O88253 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Gm10226O88253 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm10226O88253 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms