Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.51■□□□□ 0.87
Alx4O35137 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Alx4O35137 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Alx4O35137 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Alx4O35137 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Alx4O35137 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Alx4O35137 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Alx4O35137 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Alx4O35137 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Alx4O35137 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Alx4O35137 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx4O35137 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Alx4O35137 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Alx4O35137 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Alx4O35137 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Alx4O35137 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Alx4O35137 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Alx4O35137 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx4O35137 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx4O35137 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx4O35137 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Alx4O35137 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx4O35137 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx4O35137 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Alx4O35137 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx4O35137 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Alx4O35137 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx4O35137 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.45■□□□□ 0.86
Alx4O35137 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx4O35137 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx4O35137 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Alx4O35137 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.44■□□□□ 0.86
Alx4O35137 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Alx4O35137 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx4O35137 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx4O35137 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx4O35137 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx4O35137 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Alx4O35137 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Alx4O35137 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alx4O35137 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Alx4O35137 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alx4O35137 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.43■□□□□ 0.86
Alx4O35137 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alx4O35137 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Alx4O35137 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Alx4O35137 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx4O35137 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Alx4O35137 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Alx4O35137 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx4O35137 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx4O35137 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx4O35137 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Alx4O35137 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx4O35137 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx4O35137 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.4■□□□□ 0.86
Alx4O35137 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx4O35137 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Alx4O35137 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx4O35137 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Alx4O35137 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Alx4O35137 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Alx4O35137 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alx4O35137 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alx4O35137 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Alx4O35137 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.37■□□□□ 0.85
Alx4O35137 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx4O35137 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx4O35137 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
Alx4O35137 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Alx4O35137 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx4O35137 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alx4O35137 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx4O35137 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx4O35137 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx4O35137 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alx4O35137 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx4O35137 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx4O35137 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx4O35137 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alx4O35137 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.34■□□□□ 0.85
Alx4O35137 Gm45855-201ENSMUST00000212546 880 ntBASIC20.34■□□□□ 0.85
Alx4O35137 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx4O35137 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Alx4O35137 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Alx4O35137 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx4O35137 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alx4O35137 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Alx4O35137 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.31■□□□□ 0.84
Alx4O35137 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.31■□□□□ 0.84
Alx4O35137 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx4O35137 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alx4O35137 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Alx4O35137 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Alx4O35137 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Alx4O35137 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alx4O35137 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx4O35137 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alx4O35137 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alx4O35137 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms