Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2al1kJ3QP08 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2al1kJ3QP08 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC13.55□□□□□ -0.24
H2al1kJ3QP08 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2al1kJ3QP08 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
H2al1kJ3QP08 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2al1kJ3QP08 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2al1kJ3QP08 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2al1kJ3QP08 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2al1kJ3QP08 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2al1kJ3QP08 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2al1kJ3QP08 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.53□□□□□ -0.24
H2al1kJ3QP08 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
H2al1kJ3QP08 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2al1kJ3QP08 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2al1kJ3QP08 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC13.52□□□□□ -0.25
H2al1kJ3QP08 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2al1kJ3QP08 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2al1kJ3QP08 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2al1kJ3QP08 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC13.51□□□□□ -0.25
H2al1kJ3QP08 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2al1kJ3QP08 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2al1kJ3QP08 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2al1kJ3QP08 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
H2al1kJ3QP08 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
H2al1kJ3QP08 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
H2al1kJ3QP08 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2al1kJ3QP08 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2al1kJ3QP08 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2al1kJ3QP08 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2al1kJ3QP08 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2al1kJ3QP08 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2al1kJ3QP08 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2al1kJ3QP08 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2al1kJ3QP08 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2al1kJ3QP08 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2al1kJ3QP08 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2al1kJ3QP08 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2al1kJ3QP08 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2al1kJ3QP08 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2al1kJ3QP08 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2al1kJ3QP08 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.46□□□□□ -0.25
H2al1kJ3QP08 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
H2al1kJ3QP08 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
H2al1kJ3QP08 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC13.46□□□□□ -0.26
H2al1kJ3QP08 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2al1kJ3QP08 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2al1kJ3QP08 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2al1kJ3QP08 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
H2al1kJ3QP08 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2al1kJ3QP08 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2al1kJ3QP08 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
H2al1kJ3QP08 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
H2al1kJ3QP08 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC13.44□□□□□ -0.26
H2al1kJ3QP08 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2al1kJ3QP08 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2al1kJ3QP08 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2al1kJ3QP08 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2al1kJ3QP08 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2al1kJ3QP08 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2al1kJ3QP08 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2al1kJ3QP08 Iqck-206ENSMUST00000208658 2891 ntBASIC13.43□□□□□ -0.26
H2al1kJ3QP08 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2al1kJ3QP08 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
H2al1kJ3QP08 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H2al1kJ3QP08 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H2al1kJ3QP08 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
H2al1kJ3QP08 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC13.41□□□□□ -0.26
H2al1kJ3QP08 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC13.41□□□□□ -0.26
H2al1kJ3QP08 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H2al1kJ3QP08 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.4□□□□□ -0.26
H2al1kJ3QP08 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H2al1kJ3QP08 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H2al1kJ3QP08 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2al1kJ3QP08 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
H2al1kJ3QP08 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2al1kJ3QP08 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
H2al1kJ3QP08 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2al1kJ3QP08 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
H2al1kJ3QP08 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2al1kJ3QP08 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
H2al1kJ3QP08 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2al1kJ3QP08 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H2al1kJ3QP08 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
H2al1kJ3QP08 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2al1kJ3QP08 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2al1kJ3QP08 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2al1kJ3QP08 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
H2al1kJ3QP08 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2al1kJ3QP08 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms