Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa8J3QNX5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Shisa8J3QNX5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa8J3QNX5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa8J3QNX5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa8J3QNX5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa8J3QNX5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa8J3QNX5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa8J3QNX5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa8J3QNX5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Shisa8J3QNX5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa8J3QNX5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.92■□□□□ 0.94
Shisa8J3QNX5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.91■□□□□ 0.94
Shisa8J3QNX5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.91■□□□□ 0.94
Shisa8J3QNX5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa8J3QNX5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa8J3QNX5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa8J3QNX5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa8J3QNX5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.9■□□□□ 0.94
Shisa8J3QNX5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa8J3QNX5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Shisa8J3QNX5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa8J3QNX5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shisa8J3QNX5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Shisa8J3QNX5 Particl-201ENSMUST00000205370 1560 ntBASIC20.89■□□□□ 0.93
Shisa8J3QNX5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa8J3QNX5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa8J3QNX5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shisa8J3QNX5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa8J3QNX5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa8J3QNX5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa8J3QNX5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.86■□□□□ 0.93
Shisa8J3QNX5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa8J3QNX5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa8J3QNX5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa8J3QNX5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa8J3QNX5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa8J3QNX5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa8J3QNX5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.85■□□□□ 0.93
Shisa8J3QNX5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa8J3QNX5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa8J3QNX5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa8J3QNX5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa8J3QNX5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.84■□□□□ 0.93
Shisa8J3QNX5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.84■□□□□ 0.93
Shisa8J3QNX5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shisa8J3QNX5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shisa8J3QNX5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.84■□□□□ 0.93
Shisa8J3QNX5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shisa8J3QNX5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shisa8J3QNX5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Shisa8J3QNX5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Shisa8J3QNX5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.83■□□□□ 0.93
Shisa8J3QNX5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.83■□□□□ 0.93
Shisa8J3QNX5 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Shisa8J3QNX5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shisa8J3QNX5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shisa8J3QNX5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shisa8J3QNX5 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.82■□□□□ 0.92
Shisa8J3QNX5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shisa8J3QNX5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Shisa8J3QNX5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Shisa8J3QNX5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.81■□□□□ 0.92
Shisa8J3QNX5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa8J3QNX5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa8J3QNX5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa8J3QNX5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Shisa8J3QNX5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Shisa8J3QNX5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa8J3QNX5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Shisa8J3QNX5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shisa8J3QNX5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shisa8J3QNX5 Zfp131-205ENSMUST00000223812 663 ntBASIC20.79■□□□□ 0.92
Shisa8J3QNX5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Shisa8J3QNX5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shisa8J3QNX5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa8J3QNX5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
Shisa8J3QNX5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa8J3QNX5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa8J3QNX5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shisa8J3QNX5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shisa8J3QNX5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Shisa8J3QNX5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa8J3QNX5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa8J3QNX5 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa8J3QNX5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa8J3QNX5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shisa8J3QNX5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa8J3QNX5 Gm9397-201ENSMUST00000200125 605 ntBASIC20.75■□□□□ 0.91
Shisa8J3QNX5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shisa8J3QNX5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa8J3QNX5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa8J3QNX5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Shisa8J3QNX5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Shisa8J3QNX5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Shisa8J3QNX5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa8J3QNX5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa8J3QNX5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shisa8J3QNX5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Shisa8J3QNX5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms