Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sgo2bJ3QMK1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sgo2bJ3QMK1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sgo2bJ3QMK1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sgo2bJ3QMK1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sgo2bJ3QMK1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.86■■□□□ 1.25
Sgo2bJ3QMK1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Sgo2bJ3QMK1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.86■■□□□ 1.25
Sgo2bJ3QMK1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sgo2bJ3QMK1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sgo2bJ3QMK1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sgo2bJ3QMK1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sgo2bJ3QMK1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sgo2bJ3QMK1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sgo2bJ3QMK1 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.84■■□□□ 1.25
Sgo2bJ3QMK1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Sgo2bJ3QMK1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sgo2bJ3QMK1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Sgo2bJ3QMK1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.83■■□□□ 1.25
Sgo2bJ3QMK1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sgo2bJ3QMK1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sgo2bJ3QMK1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Sgo2bJ3QMK1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sgo2bJ3QMK1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sgo2bJ3QMK1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sgo2bJ3QMK1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.79■■□□□ 1.24
Sgo2bJ3QMK1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Sgo2bJ3QMK1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sgo2bJ3QMK1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sgo2bJ3QMK1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.78■■□□□ 1.24
Sgo2bJ3QMK1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Sgo2bJ3QMK1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sgo2bJ3QMK1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Sgo2bJ3QMK1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sgo2bJ3QMK1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.75■■□□□ 1.23
Sgo2bJ3QMK1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sgo2bJ3QMK1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgo2bJ3QMK1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgo2bJ3QMK1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgo2bJ3QMK1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sgo2bJ3QMK1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.72■■□□□ 1.23
Sgo2bJ3QMK1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Sgo2bJ3QMK1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sgo2bJ3QMK1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Sgo2bJ3QMK1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sgo2bJ3QMK1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgo2bJ3QMK1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgo2bJ3QMK1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgo2bJ3QMK1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgo2bJ3QMK1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgo2bJ3QMK1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sgo2bJ3QMK1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.69■■□□□ 1.22
Sgo2bJ3QMK1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sgo2bJ3QMK1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sgo2bJ3QMK1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sgo2bJ3QMK1 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.68■■□□□ 1.22
Sgo2bJ3QMK1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sgo2bJ3QMK1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sgo2bJ3QMK1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sgo2bJ3QMK1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sgo2bJ3QMK1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sgo2bJ3QMK1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sgo2bJ3QMK1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sgo2bJ3QMK1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgo2bJ3QMK1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgo2bJ3QMK1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.63■■□□□ 1.21
Sgo2bJ3QMK1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms