Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sgo2bJ3QMK1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sgo2bJ3QMK1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sgo2bJ3QMK1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sgo2bJ3QMK1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sgo2bJ3QMK1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.86■■□□□ 1.25
Sgo2bJ3QMK1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Sgo2bJ3QMK1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.86■■□□□ 1.25
Sgo2bJ3QMK1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sgo2bJ3QMK1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sgo2bJ3QMK1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sgo2bJ3QMK1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sgo2bJ3QMK1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sgo2bJ3QMK1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sgo2bJ3QMK1 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.84■■□□□ 1.25
Sgo2bJ3QMK1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Sgo2bJ3QMK1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sgo2bJ3QMK1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Sgo2bJ3QMK1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.83■■□□□ 1.25
Sgo2bJ3QMK1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sgo2bJ3QMK1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sgo2bJ3QMK1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Sgo2bJ3QMK1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Sgo2bJ3QMK1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sgo2bJ3QMK1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sgo2bJ3QMK1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sgo2bJ3QMK1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.79■■□□□ 1.24
Sgo2bJ3QMK1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Sgo2bJ3QMK1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sgo2bJ3QMK1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sgo2bJ3QMK1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.78■■□□□ 1.24
Sgo2bJ3QMK1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Sgo2bJ3QMK1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sgo2bJ3QMK1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sgo2bJ3QMK1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sgo2bJ3QMK1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Sgo2bJ3QMK1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sgo2bJ3QMK1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.75■■□□□ 1.23
Sgo2bJ3QMK1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sgo2bJ3QMK1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgo2bJ3QMK1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgo2bJ3QMK1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sgo2bJ3QMK1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sgo2bJ3QMK1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sgo2bJ3QMK1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.72■■□□□ 1.23
Sgo2bJ3QMK1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Sgo2bJ3QMK1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sgo2bJ3QMK1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Sgo2bJ3QMK1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sgo2bJ3QMK1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgo2bJ3QMK1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgo2bJ3QMK1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgo2bJ3QMK1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgo2bJ3QMK1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sgo2bJ3QMK1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sgo2bJ3QMK1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.69■■□□□ 1.22
Sgo2bJ3QMK1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sgo2bJ3QMK1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sgo2bJ3QMK1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sgo2bJ3QMK1 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.68■■□□□ 1.22
Sgo2bJ3QMK1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sgo2bJ3QMK1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sgo2bJ3QMK1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sgo2bJ3QMK1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sgo2bJ3QMK1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Sgo2bJ3QMK1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sgo2bJ3QMK1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sgo2bJ3QMK1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sgo2bJ3QMK1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgo2bJ3QMK1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sgo2bJ3QMK1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.63■■□□□ 1.21
Sgo2bJ3QMK1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms