Protein–RNA interactions for Protein: A0A1Y7VNZ0

Dcaf4, DDB1 and CUL4-associated factor 4, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dcaf4A0A1Y7VNZ0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.61■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.59■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.58■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Dcaf4A0A1Y7VNZ0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.57■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.57■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.56■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.54■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dcaf4A0A1Y7VNZ0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.52■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.51■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.51■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.5■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.48■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.47■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Dcaf4A0A1Y7VNZ0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Dcaf4A0A1Y7VNZ0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Dcaf4A0A1Y7VNZ0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Dcaf4A0A1Y7VNZ0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Dcaf4A0A1Y7VNZ0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Dcaf4A0A1Y7VNZ0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Dcaf4A0A1Y7VNZ0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Dcaf4A0A1Y7VNZ0 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.43■□□□□ 0.86
Dcaf4A0A1Y7VNZ0 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.43■□□□□ 0.86
Dcaf4A0A1Y7VNZ0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.43■□□□□ 0.86
Dcaf4A0A1Y7VNZ0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms