Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv13-2A0A140T8N6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv13-2A0A140T8N6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv13-2A0A140T8N6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-2A0A140T8N6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-2A0A140T8N6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.92■□□□□ 0.14
Trbv13-2A0A140T8N6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-2A0A140T8N6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-2A0A140T8N6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-2A0A140T8N6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-2A0A140T8N6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv13-2A0A140T8N6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.91■□□□□ 0.14
Trbv13-2A0A140T8N6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv13-2A0A140T8N6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv13-2A0A140T8N6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv13-2A0A140T8N6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-2A0A140T8N6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-2A0A140T8N6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-2A0A140T8N6 Gm11599-201ENSMUST00000118720 878 ntBASIC15.89■□□□□ 0.13
Trbv13-2A0A140T8N6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.89■□□□□ 0.13
Trbv13-2A0A140T8N6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-2A0A140T8N6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-2A0A140T8N6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-2A0A140T8N6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-2A0A140T8N6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv13-2A0A140T8N6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv13-2A0A140T8N6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv13-2A0A140T8N6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv13-2A0A140T8N6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbv13-2A0A140T8N6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbv13-2A0A140T8N6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-2A0A140T8N6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-2A0A140T8N6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Trbv13-2A0A140T8N6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-2A0A140T8N6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-2A0A140T8N6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Trbv13-2A0A140T8N6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv13-2A0A140T8N6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv13-2A0A140T8N6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv13-2A0A140T8N6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trbv13-2A0A140T8N6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv13-2A0A140T8N6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv13-2A0A140T8N6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv13-2A0A140T8N6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv13-2A0A140T8N6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv13-2A0A140T8N6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv13-2A0A140T8N6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trbv13-2A0A140T8N6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trbv13-2A0A140T8N6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv13-2A0A140T8N6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv13-2A0A140T8N6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trbv13-2A0A140T8N6 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.83■□□□□ 0.12
Trbv13-2A0A140T8N6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trbv13-2A0A140T8N6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.83■□□□□ 0.12
Trbv13-2A0A140T8N6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv13-2A0A140T8N6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv13-2A0A140T8N6 Gm4799-201ENSMUST00000095396 657 ntBASIC15.82■□□□□ 0.12
Trbv13-2A0A140T8N6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv13-2A0A140T8N6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv13-2A0A140T8N6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv13-2A0A140T8N6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbv13-2A0A140T8N6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trbv13-2A0A140T8N6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbv13-2A0A140T8N6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv13-2A0A140T8N6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv13-2A0A140T8N6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv13-2A0A140T8N6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv13-2A0A140T8N6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv13-2A0A140T8N6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trbv13-2A0A140T8N6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv13-2A0A140T8N6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.8■□□□□ 0.12
Trbv13-2A0A140T8N6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv13-2A0A140T8N6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbv13-2A0A140T8N6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv13-2A0A140T8N6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv13-2A0A140T8N6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv13-2A0A140T8N6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv13-2A0A140T8N6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv13-2A0A140T8N6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv13-2A0A140T8N6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv13-2A0A140T8N6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv13-2A0A140T8N6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trbv13-2A0A140T8N6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv13-2A0A140T8N6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv13-2A0A140T8N6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv13-2A0A140T8N6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv13-2A0A140T8N6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv13-2A0A140T8N6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv13-2A0A140T8N6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.77■□□□□ 0.12
Trbv13-2A0A140T8N6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trbv13-2A0A140T8N6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv13-2A0A140T8N6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv13-2A0A140T8N6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.77■□□□□ 0.12
Trbv13-2A0A140T8N6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.77■□□□□ 0.12
Trbv13-2A0A140T8N6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv13-2A0A140T8N6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv13-2A0A140T8N6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv13-2A0A140T8N6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv13-2A0A140T8N6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trbv13-2A0A140T8N6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms