Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.15■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.15■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.15■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.14■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.13■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.12■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.11■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.09■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.08■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37136-201ENSMUST00000194368 194 ntBASIC20.06■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.02■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.02■□□□□ 0.8
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.01■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.01■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.01■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.97■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.97■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.97■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav15d-2-dv6d-2A0A0G2JGQ7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.95■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.94■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.94■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15d-2-dv6d-2A0A0G2JGQ7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms