Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.33■□□□□ 0.69
Igkv4-50A0A0B4J1J0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Igkv4-50A0A0B4J1J0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv4-50A0A0B4J1J0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Igkv4-50A0A0B4J1J0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Igkv4-50A0A0B4J1J0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.29■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.29■□□□□ 0.68
Igkv4-50A0A0B4J1J0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv4-50A0A0B4J1J0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.28■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv4-50A0A0B4J1J0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv4-50A0A0B4J1J0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.24■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv4-50A0A0B4J1J0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.24■□□□□ 0.67
Igkv4-50A0A0B4J1J0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.24■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv4-50A0A0B4J1J0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.23■□□□□ 0.67
Igkv4-50A0A0B4J1J0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv4-50A0A0B4J1J0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.23■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.22■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.22■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.21■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Igkv4-50A0A0B4J1J0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv4-50A0A0B4J1J0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Igkv4-50A0A0B4J1J0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Igkv4-50A0A0B4J1J0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv4-50A0A0B4J1J0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv4-50A0A0B4J1J0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv4-50A0A0B4J1J0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Igkv4-50A0A0B4J1J0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Igkv4-50A0A0B4J1J0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv4-50A0A0B4J1J0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv4-50A0A0B4J1J0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Igkv4-50A0A0B4J1J0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms